Factsheet for HORVU3Hr1G068630.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G068660.1	Barley	cytosol	65.79	42.55
GSMUA_Achr5P19360_001	Banana	cytosol	61.18	39.57
AT1G16470.2	Thale cress	cytosol	59.87	38.72
Bra008402.1-P	Field mustard	cytosol	59.87	38.72
Bra035099.1-P	Field mustard	cytosol	59.87	38.72
CDX68003	Canola	cytosol, extracellular	59.87	38.72
CDX79306	Canola	cytosol	59.87	38.72
CDY22253	Canola	cytosol	59.87	38.72
CDY26894	Canola	cytosol	59.87	38.72
AT1G79210.1	Thale cress	cytosol	59.21	38.3
VIT_01s0011g01960.t01	Wine grape	cytosol	59.21	38.3
KRH43728	Soybean	cytosol, endoplasmic reticulum, nucleus	59.21	38.3
KRH75739	Soybean	cytosol, endoplasmic reticulum, nucleus	58.55	37.87
KRH65961	Soybean	cytosol	58.55	37.87
KRH13728	Soybean	cytosol	58.55	37.87
GSMUA_Achr8P13980_001	Banana	cytosol	58.55	37.87
Bra003618.1-P	Field mustard	cytosol	59.87	37.14
HORVU2Hr1G036390.6	Barley	plastid	65.79	37.04
Solyc10g008010.2.1	Tomato	extracellular, plastid	57.24	37.02
Solyc07g055080.2.1	Tomato	cytosol, endoplasmic reticulum	57.24	37.02
PGSC0003DMT400052657	Potato	cytosol	57.24	37.02
PGSC0003DMT400027339	Potato	cytosol	57.24	37.02
CDX88517	Canola	cytosol	59.87	29.64
CDX87400	Canola	extracellular	59.87	28.44
HORVU6Hr1G051730.1	Barley	cytosol	21.05	25.81
HORVU5Hr1G083350.1	Barley	cytosol	29.61	18.07
HORVU4Hr1G040770.1	Barley	cytosol	24.34	15.61
HORVU7Hr1G057390.2	Barley	cytosol, nucleus, plastid	28.29	15.14
HORVU7Hr1G027220.2	Barley	cytosol	26.32	15.09
HORVU6Hr1G017500.1	Barley	cytosol	24.34	12.85
HORVU4Hr1G076770.2	Barley	cytosol	22.37	12.06
HORVU4Hr1G042970.6	Barley	cytosol, golgi, nucleus	24.34	11.31
HORVU5Hr1G076600.1	Barley	plastid	19.08	11.2
HORVU1Hr1G068490.1	Barley	cytosol	17.76	10.84
HORVU0Hr1G001180.1	Barley	cytosol	17.76	10.84
HORVU5Hr1G038710.1	Barley	cytosol	13.16	10.05

Protein Annotations

Gene3D:3.60.20.10	MapMan:35.1	UniProt:A0A287LHW2	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005839
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	EnsemblPlantsGene:HORVU3Hr1G068630	EnsemblPlants:HORVU3Hr1G068630.1
InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF16	InterPro:Proteasome_alpha-type	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha2	SUPFAM:SSF56235	UniParc:UPI000B464C49

Description

Proteasome endopeptidase complex [Source:UniProtKB/TrEMBL;Acc:A0A287LHW2]

Coordinates

chrchr3H:-:520169074..520173938

Molecular Weight (calculated)

17012.2 Da

IEP (calculated)

7.963

GRAVY (calculated)

-0.414

Length

152 amino acids

Sequence
(BLAST)

001: MLQSRPKTQN SSSKLHRNIC CTHNLICCSG VRPFGVSLLI AGYDDNGPQL YQVDPSGSYF SWKASAMGKN VSNAKTFLEK RYTEDMELDD AIHTAILTLK
101: EGYEGQISAN NIEIGVIRAD REFNPQMEHL KRLIFRNGGS TFFPFASFPN PS

Best Arabidopsis Sequence Match ( AT1G16470.1 )
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA SNGVVIATEK KLPSILVDEA SVQKIQHLTP NIGVVYSGMG PDFRVLVRKS RKQAEQYLRL
101: YKEPIPVTQL VRETATVMQE FTQSGGVRPF GVSLLVAGYD DKGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGFE
201: GEISSKNIEI GKIGADKVFR VLTPAEIDDY LAEVE

Arabidopsis Description

PAB1Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A178WA13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.