Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G130500.1 | Wheat | plastid | 86.79 | 92.0 |
| TraesCS7D01G129900.1 | Wheat | cytosol | 86.79 | 92.0 |
| TraesCS7B01G030800.1 | Wheat | plastid | 86.42 | 91.6 |
| Zm00001d045194_P001 | Maize | extracellular | 84.91 | 90.0 |
| Os06t0177100-01 | Rice | plastid | 84.53 | 89.6 |
| Os06t0176000-01 | Rice | cytosol | 84.53 | 89.6 |
| OQU75904 | Sorghum | cytosol | 84.53 | 89.6 |
| Os06t0167600-01 | Rice | cytosol | 84.15 | 89.2 |
| Zm00001d036319_P001 | Maize | cytosol | 84.15 | 89.2 |
| PGSC0003DMT400049388 | Potato | cytosol | 75.85 | 80.72 |
| Solyc02g081700.1.1 | Tomato | extracellular | 75.09 | 80.24 |
| VIT_10s0042g00070.t01 | Wine grape | cytosol | 75.09 | 79.6 |
| KRH49455 | Soybean | endoplasmic reticulum, nucleus | 75.09 | 79.6 |
| GSMUA_Achr7P21280_001 | Banana | cytosol | 68.68 | 79.48 |
| KRH00322 | Soybean | cytosol | 74.72 | 79.2 |
| KRH76017 | Soybean | cytosol | 74.72 | 79.2 |
| KRH65617 | Soybean | nucleus | 74.72 | 79.2 |
| Bra023851.1-P | Field mustard | cytosol | 74.72 | 79.2 |
| Bra031328.1-P | Field mustard | cytosol, mitochondrion | 74.34 | 78.8 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 74.34 | 78.8 |
| CDY37382 | Canola | cytosol | 59.62 | 78.61 |
| CDY69258 | Canola | cytosol, mitochondrion | 61.51 | 78.37 |
| CDY66240 | Canola | extracellular | 59.62 | 77.83 |
| CDY39501 | Canola | cytosol, mitochondrion | 58.49 | 77.11 |
| CDY19309 | Canola | extracellular | 58.49 | 77.11 |
| GSMUA_Achr6P02000_001 | Banana | cytosol | 55.47 | 75.77 |
| AT4G15165.1 | Thale cress | cytosol | 59.25 | 75.48 |
| GSMUA_Achr4P00300_001 | Banana | cytosol | 74.34 | 73.78 |
| Bra037085.1-P | Field mustard | cytosol | 75.47 | 64.94 |
| HORVU4Hr1G040770.1 | Barley | cytosol | 34.72 | 38.82 |
| HORVU6Hr1G051730.1 | Barley | cytosol | 16.98 | 36.29 |
| HORVU5Hr1G038710.1 | Barley | cytosol | 26.79 | 35.68 |
| HORVU3Hr1G068660.1 | Barley | cytosol | 31.32 | 35.32 |
| HORVU5Hr1G083350.1 | Barley | cytosol | 32.45 | 34.54 |
| HORVU7Hr1G057390.2 | Barley | cytosol, nucleus, plastid | 32.83 | 30.63 |
| HORVU2Hr1G036390.6 | Barley | plastid | 30.19 | 29.63 |
| HORVU1Hr1G068490.1 | Barley | cytosol | 27.17 | 28.92 |
| HORVU0Hr1G001180.1 | Barley | cytosol | 27.17 | 28.92 |
| HORVU4Hr1G076770.2 | Barley | cytosol | 29.06 | 27.3 |
| HORVU3Hr1G068630.1 | Barley | mitochondrion | 15.09 | 26.32 |
| HORVU6Hr1G017500.1 | Barley | cytosol | 27.92 | 25.69 |
| HORVU5Hr1G076600.1 | Barley | plastid | 23.4 | 23.94 |
| HORVU4Hr1G042970.6 | Barley | cytosol, golgi, nucleus | 21.51 | 17.43 |
Protein Annotations
| MapMan:19.2.6.1.1.3 | Gene3D:3.60.20.10 | UniProt:A0A287VTN2 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 |
| GO:GO:0051603 | EnsemblPlantsGene:HORVU7Hr1G027220 | EnsemblPlants:HORVU7Hr1G027220.2 | InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N |
| PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF13 |
| InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | InterPro:Proteasome_subunit_alpha4 | SMART:SM00948 | SUPFAM:SSF56235 |
| UniParc:UPI000B473B87 | SEG:seg | : | : | : | : |
Description
Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A287VTN2]
Coordinates
chrchr7H:-:48177917..48180632
Molecular Weight (calculated)
28575.1 Da
IEP (calculated)
6.282
GRAVY (calculated)
-0.197
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: PTLLPPLPLP PKSPTRTLAA ADPPAAEMSR RYDSRTTIFS PEGRLYQVEY AMEAIGNAGS ALGILAADGV VLVGEKKVTS KLLQSSRSAE KMYKIDSHLA
101: CAVAGIMSDA NILINTARLH AQRYALSYQE PIPVEQLVQS LCDTKQGYTQ FGGLRPFGVS FLFAGWDKNH GFQLYMSDPS GNYGGWKAAA VGANSQAAQS
201: MLKQDYKDGM TREEAVALAL KVLSKTMDST SLTADKLELA EVFVQPGTGE VQYQREASIP SSEFA
101: CAVAGIMSDA NILINTARLH AQRYALSYQE PIPVEQLVQS LCDTKQGYTQ FGGLRPFGVS FLFAGWDKNH GFQLYMSDPS GNYGGWKAAA VGANSQAAQS
201: MLKQDYKDGM TREEAVALAL KVLSKTMDST SLTADKLELA EVFVQPGTGE VQYQREASIP SSEFA
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
Arabidopsis Description
PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.