Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19309 | Canola | extracellular | 99.5 | 99.5 |
| CDY69258 | Canola | cytosol, mitochondrion | 93.03 | 89.9 |
| CDY66240 | Canola | extracellular | 88.06 | 87.19 |
| CDY37382 | Canola | cytosol | 81.09 | 81.09 |
| GSMUA_Achr6P02000_001 | Banana | cytosol | 78.11 | 80.93 |
| Bra023851.1-P | Field mustard | cytosol | 99.0 | 79.6 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 95.52 | 76.8 |
| KRH00322 | Soybean | cytosol | 91.04 | 73.2 |
| KRH49455 | Soybean | endoplasmic reticulum, nucleus | 90.05 | 72.4 |
| KRH65617 | Soybean | nucleus | 89.55 | 72.0 |
| KRH76017 | Soybean | cytosol | 89.55 | 72.0 |
| VIT_10s0042g00070.t01 | Wine grape | cytosol | 89.05 | 71.6 |
| Solyc02g081700.1.1 | Tomato | extracellular | 87.56 | 70.97 |
| PGSC0003DMT400049388 | Potato | cytosol | 84.08 | 67.87 |
| Zm00001d045194_P001 | Maize | extracellular | 84.08 | 67.6 |
| GSMUA_Achr7P21280_001 | Banana | cytosol | 76.12 | 66.81 |
| Zm00001d036319_P001 | Maize | cytosol | 83.08 | 66.8 |
| TraesCS7D01G129900.1 | Wheat | cytosol | 83.08 | 66.8 |
| TraesCS7B01G030800.1 | Wheat | plastid | 83.08 | 66.8 |
| TraesCS7A01G130500.1 | Wheat | plastid | 83.08 | 66.8 |
| OQU75904 | Sorghum | cytosol | 83.08 | 66.8 |
| Os06t0167600-01 | Rice | cytosol | 81.09 | 65.2 |
| Os06t0176000-01 | Rice | cytosol | 81.09 | 65.2 |
| Os06t0177100-01 | Rice | plastid | 81.09 | 65.2 |
| GSMUA_Achr4P00300_001 | Banana | cytosol | 85.57 | 64.42 |
| HORVU7Hr1G027220.2 | Barley | cytosol | 77.11 | 58.49 |
| CDY21248 | Canola | cytosol | 20.4 | 29.29 |
| CDY08208 | Canola | peroxisome | 34.33 | 28.28 |
| CDY51800 | Canola | peroxisome | 34.33 | 27.6 |
| CDY29009 | Canola | cytosol | 32.84 | 26.4 |
| CDX90655 | Canola | cytosol | 32.84 | 26.4 |
| CDX77988 | Canola | cytosol, extracellular | 32.34 | 26.0 |
| CDX73737 | Canola | cytosol, extracellular | 32.34 | 26.0 |
| CDY02493 | Canola | mitochondrion | 35.32 | 25.36 |
| CDY25683 | Canola | cytosol, plastid | 35.32 | 25.09 |
| CDY47593 | Canola | cytosol | 31.84 | 23.44 |
| CDY17035 | Canola | cytosol | 31.34 | 23.08 |
| CDY50408 | Canola | cytosol, extracellular | 27.86 | 22.95 |
| CDY02422 | Canola | cytosol | 30.85 | 22.88 |
| CDX71518 | Canola | cytosol | 30.85 | 22.88 |
| CDY33398 | Canola | cytosol, extracellular | 27.86 | 22.76 |
| CDY18045 | Canola | cytosol | 27.86 | 22.76 |
| CDX79306 | Canola | cytosol | 26.37 | 22.55 |
| CDX68003 | Canola | cytosol, extracellular | 26.37 | 22.55 |
| CDY26894 | Canola | cytosol | 26.37 | 22.55 |
| CDY22253 | Canola | cytosol | 26.37 | 22.55 |
| CDY52371 | Canola | cytosol | 30.85 | 22.55 |
| CDY04473 | Canola | cytosol | 27.86 | 22.49 |
| CDY48190 | Canola | cytosol | 27.86 | 22.49 |
| CDX71476 | Canola | cytosol | 27.86 | 22.49 |
| CDX77059 | Canola | cytosol | 27.86 | 22.49 |
| CDX95156 | Canola | cytosol | 30.85 | 22.38 |
| CDX93103 | Canola | cytosol | 27.86 | 21.29 |
| CDX81411 | Canola | mitochondrion, plastid | 28.86 | 20.49 |
| CDX88517 | Canola | cytosol | 26.37 | 17.26 |
| CDX87400 | Canola | extracellular | 26.37 | 16.56 |
Protein Annotations
| Gene3D:3.60.20.10 | MapMan:50.3.4 | GO:A0A078HPK1 | UniProt:A0A078HPK1 | EnsemblPlants:CDY39501 | ProteinID:CDY39501 |
| ProteinID:CDY39501.1 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 |
| GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0051603 | EnsemblPlantsGene:GSBRNA2T00068014001 |
| InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 |
| PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF13 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b |
| InterPro:Proteasome_subunit_alpha4 | SMART:SM00948 | SUPFAM:SSF56235 | UniParc:UPI0004EF480C | SEG:seg | : |
Description
BnaA01g24870DProteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A078HPK1]
Coordinates
chrLK032449:-:218348..219708
Molecular Weight (calculated)
21764.8 Da
IEP (calculated)
7.073
GRAVY (calculated)
-0.265
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SSEKMYKIDD HVACAVAGIM SDANILINTA RQLVQSLWWD
101: KNHGGNYGGW KAAAVGANNQ AAQSILKQDY KDDATREEAV ELALKVLSKT MDSTSLTSEK LELAEVFLTP SGSVKYHVHS PDSLTKLLVK HGVTQPAAES
201: S
101: KNHGGNYGGW KAAAVGANNQ AAQSILKQDY KDDATREEAV ELALKVLSKT MDSTSLTSEK LELAEVFLTP SGSVKYHVHS PDSLTKLLVK HGVTQPAAES
201: S
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILAK DGVVLVGEKK VTSKLLQTSS SMEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRWDRN
101: HGFQLYMSDP SGNYGGWQAA AVGANNQAAQ SILKQDYKDD ATREEVVQLA IKVLSKTMDS TSLTAEKLEL AELYLTPSKC VKYHVHSPDS LTKLLVKHGV
201: TQPAAETS
101: HGFQLYMSDP SGNYGGWQAA AVGANNQAAQ SILKQDYKDD ATREEVVQLA IKVLSKTMDS TSLTAEKLEL AELYLTPSKC VKYHVHSPDS LTKLLVKHGV
201: TQPAAETS
Arabidopsis Description
PAC2Putative proteasome subunit alpha type-4-B [Source:UniProtKB/Swiss-Prot;Acc:F4JJE5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.