CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030921.1-P	Field mustard	cytosol	84.64	100.0
AT1G53850.1	Thale cress	cytosol	83.21	98.31
KRH69234	Soybean	endoplasmic reticulum	81.79	96.62
KRG90710	Soybean	peroxisome	81.07	95.78
KRH31817	Soybean	cytosol	81.07	95.78
KRH36037	Soybean	endoplasmic reticulum, nucleus	81.07	95.78
CDY08208	Canola	peroxisome	83.21	95.49
PGSC0003DMT400024982	Potato	cytosol, nucleus, peroxisome	80.36	94.94
Solyc08g016510.2.1	Tomato	extracellular	80.36	94.94
PGSC0003DMT400054523	Potato	cytosol	80.0	94.51
GSMUA_Achr11P...	Banana	peroxisome	80.0	94.51
Solyc02g070510.2.1	Tomato	nucleus	80.0	94.51
OQU93221	Sorghum	cytosol	79.64	94.09
Os11t0615700-01	Rice	peroxisome	79.29	93.67
TraesCS5B01G114000.1	Wheat	golgi, plastid, unclear	79.29	93.67
Zm00001d027688_P002	Maize	peroxisome	79.29	93.67
EES10115	Sorghum	peroxisome	79.29	93.67
CDY51800	Canola	peroxisome	83.21	93.2
TraesCS4A01G167300.1	Wheat	peroxisome	77.86	91.98
TraesCS4B01G151700.1	Wheat	golgi, unclear	77.86	91.98
TraesCS4D01G157700.1	Wheat	peroxisome	77.86	91.98
HORVU4Hr1G040770.1	Barley	cytosol	77.86	91.98
CDY25683	Canola	cytosol, plastid	89.64	88.69
TraesCS5D01G121300.1	Wheat	peroxisome	73.21	86.5
TraesCS5A01G109000.1	Wheat	peroxisome	59.29	85.57
VIT_09s0002g00350.t01	Wine grape	endoplasmic reticulum	84.64	80.89
Zm00001d048403_P001	Maize	extracellular	82.14	78.5
CDY21248	Canola	cytosol	21.43	42.86
CDY69258	Canola	cytosol, mitochondrion	27.14	36.54
CDY66240	Canola	extracellular	26.43	36.45
CDX73737	Canola	cytosol, extracellular	31.79	35.6
CDX77988	Canola	cytosol, extracellular	31.79	35.6
CDY29009	Canola	cytosol	31.79	35.6
CDY39501	Canola	cytosol, mitochondrion	25.36	35.32
CDY37382	Canola	cytosol	25.36	35.32
CDX90655	Canola	cytosol	31.43	35.2
CDY19309	Canola	extracellular	25.0	34.83
CDX68003	Canola	cytosol, extracellular	28.21	33.62
CDX79306	Canola	cytosol	28.21	33.62
CDY26894	Canola	cytosol	28.21	33.62
CDY22253	Canola	cytosol	28.21	33.62
CDY02422	Canola	cytosol	31.43	32.47
CDX71518	Canola	cytosol	31.07	32.1
CDY52371	Canola	cytosol	31.43	32.0
CDY47593	Canola	cytosol	31.07	31.87
CDY17035	Canola	cytosol	31.07	31.87
CDX95156	Canola	cytosol	31.43	31.77
CDY33398	Canola	cytosol, extracellular	26.43	30.08
CDY18045	Canola	cytosol	26.43	30.08
CDY50408	Canola	cytosol, extracellular	25.71	29.51
CDX93103	Canola	cytosol	26.43	28.14
CDX88517	Canola	cytosol	28.93	26.38
CDX81411	Canola	mitochondrion, plastid	26.43	26.15
CDY04473	Canola	cytosol	23.21	26.1
CDX77059	Canola	cytosol	23.21	26.1
CDY48190	Canola	cytosol	23.21	26.1
CDX71476	Canola	cytosol	23.21	26.1
CDX87400	Canola	extracellular	28.93	25.31

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	GO:A0A078ESF9	EnsemblPlants:CDY02493	ProteinID:CDY02493	ProteinID:CDY02493.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005839	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0043161	GO:GO:0051603
EnsemblPlantsGene:GSBRNA2T00114135001	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584
ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5
InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI0004EE48BE	:

Description

BnaA08g01000D

Coordinates

chrLK031935:+:445767..451051

Molecular Weight (calculated)

31101.0 Da

IEP (calculated)

5.248

GRAVY (calculated)

-0.310

Length

280 amino acids

Sequence
(BLAST)

001: MKLCLIGDNI YMRAKRIQFP RFADQSAHRH LKGFYRSKSP EKKMFLTRTE YDRGVNTFSP EGRLFQVEYA IEAIKLGSTA IGVKTKEGVV LAVEKRITSP
101: LLEPSSVEKI MEIDDHIGCA MSGLIADART LVEHARVETQ NHRFSYGEPM TVESTTQALC DLALRFGEGD EESMSRPFGV SLLIAGHDEN GPSLYYTDPS
201: GTFWQCNAKA IGSGSEGADS SLQEQFNKDL SLEEAETIAV SILKQVMEEK VTPNNVDIAK VAPAYHIYTP QEVEAVISRL

Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL

Arabidopsis Description

PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.