Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G121300.1 | Wheat | peroxisome | 91.75 | 75.11 |
| TraesCS5B01G114000.1 | Wheat | golgi, plastid, unclear | 91.75 | 75.11 |
| Zm00001d027688_P002 | Maize | peroxisome | 89.18 | 73.0 |
| EES10115 | Sorghum | peroxisome | 89.18 | 73.0 |
| OQU93221 | Sorghum | cytosol | 88.66 | 72.57 |
| KRH69234 | Soybean | endoplasmic reticulum | 88.14 | 72.15 |
| GSMUA_Achr10P... | Banana | peroxisome | 87.63 | 71.73 |
| GSMUA_Achr11P... | Banana | peroxisome | 87.63 | 71.73 |
| AT1G53850.1 | Thale cress | cytosol | 87.63 | 71.73 |
| AT3G14290.1 | Thale cress | cytosol | 87.11 | 71.31 |
| KRH36037 | Soybean | endoplasmic reticulum, nucleus | 87.11 | 71.31 |
| KRH31817 | Soybean | cytosol | 87.11 | 71.31 |
| KRG90710 | Soybean | peroxisome | 87.11 | 71.31 |
| Solyc08g016510.2.1 | Tomato | extracellular | 86.6 | 70.89 |
| TraesCS4A01G167300.1 | Wheat | peroxisome | 86.6 | 70.89 |
| PGSC0003DMT400024982 | Potato | cytosol, nucleus, peroxisome | 86.6 | 70.89 |
| Solyc02g070510.2.1 | Tomato | nucleus | 86.08 | 70.46 |
| PGSC0003DMT400054523 | Potato | cytosol | 86.08 | 70.46 |
| Bra030921.1-P | Field mustard | cytosol | 85.57 | 70.04 |
| CDY08208 | Canola | peroxisome | 86.08 | 68.44 |
| CDY51800 | Canola | peroxisome | 86.08 | 66.8 |
| CDY02493 | Canola | mitochondrion | 85.57 | 59.29 |
| CDY25683 | Canola | cytosol, plastid | 85.57 | 58.66 |
| Zm00001d048403_P001 | Maize | extracellular | 88.14 | 58.36 |
| VIT_09s0002g00350.t01 | Wine grape | endoplasmic reticulum | 88.14 | 58.36 |
| GSMUA_Achr6P10850_001 | Banana | mitochondrion | 84.02 | 53.44 |
| TraesCS5A01G329300.1 | Wheat | cytosol | 32.47 | 25.3 |
| TraesCS7A01G272000.1 | Wheat | cytosol | 32.47 | 25.3 |
| TraesCS7A01G130500.1 | Wheat | plastid | 31.96 | 24.8 |
| TraesCS3A01G285600.1 | Wheat | cytosol | 29.38 | 24.26 |
| TraesCS2A01G189400.1 | Wheat | cytosol | 29.38 | 24.26 |
| TraesCS6A01G097800.1 | Wheat | unclear | 30.41 | 20.49 |
| TraesCS4A01G008300.1 | Wheat | cytosol, golgi, plastid, unclear | 24.74 | 19.51 |
| TraesCS5A01G287400.1 | Wheat | cytosol, golgi, unclear | 21.13 | 16.47 |
| TraesCS1A01G308400.1 | Wheat | cytosol | 21.13 | 16.47 |
| TraesCS2A01G170100.1 | Wheat | mitochondrion | 22.16 | 16.04 |
Protein Annotations
| MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004298 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005839 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 |
| InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type |
| InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | EnsemblPlantsGene:TraesCS5A01G109000 | EnsemblPlants:TraesCS5A01G109000.1 | : | : |
Description
No Description!
Coordinates
chr5A:+:197210426..197213491
Molecular Weight (calculated)
21267.0 Da
IEP (calculated)
4.341
GRAVY (calculated)
-0.275
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNFVKSKIT NLPSIQEPSS VEKIMEIDEH VGCAMSGLIA DARTLVEHAR VETQNHRFSY GEPMTVESTT QAICDLALRF GEGEEESMSR PFGVSLLIAG
101: HDENGPSLYY TDPSGTFWQC NAKAIGSGSE GADSSLQEQF NKELTLQEAE TIALSILKQV MEEKVTPNNV DIARVAPNYH LYTPAEVEAV IARL
101: HDENGPSLYY TDPSGTFWQC NAKAIGSGSE GADSSLQEQF NKELTLQEAE TIALSILKQV MEEKVTPNNV DIARVAPNYH LYTPAEVEAV IARL
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
Arabidopsis Description
PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.