Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G53850.1 | Thale cress | cytosol | 98.73 | 98.73 |
| KRH69234 | Soybean | endoplasmic reticulum | 97.05 | 97.05 |
| KRH36037 | Soybean | endoplasmic reticulum, nucleus | 96.2 | 96.2 |
| KRH31817 | Soybean | cytosol | 96.2 | 96.2 |
| KRG90710 | Soybean | peroxisome | 96.2 | 96.2 |
| PGSC0003DMT400024982 | Potato | cytosol, nucleus, peroxisome | 94.94 | 94.94 |
| TraesCS5B01G114000.1 | Wheat | golgi, plastid, unclear | 94.94 | 94.94 |
| GSMUA_Achr11P... | Banana | peroxisome | 94.94 | 94.94 |
| Solyc08g016510.2.1 | Tomato | extracellular | 94.94 | 94.94 |
| Solyc02g070510.2.1 | Tomato | nucleus | 94.51 | 94.51 |
| PGSC0003DMT400054523 | Potato | cytosol | 94.51 | 94.51 |
| EES10115 | Sorghum | peroxisome | 94.09 | 94.09 |
| Os11t0615700-01 | Rice | peroxisome | 94.09 | 94.09 |
| Zm00001d027688_P002 | Maize | peroxisome | 94.09 | 94.09 |
| OQU93221 | Sorghum | cytosol | 93.67 | 93.67 |
| TraesCS4A01G167300.1 | Wheat | peroxisome | 91.98 | 91.98 |
| HORVU4Hr1G040770.1 | Barley | cytosol | 91.98 | 91.98 |
| TraesCS4B01G151700.1 | Wheat | golgi, unclear | 91.98 | 91.98 |
| TraesCS4D01G157700.1 | Wheat | peroxisome | 91.98 | 91.98 |
| TraesCS5D01G121300.1 | Wheat | peroxisome | 87.76 | 87.76 |
| TraesCS5A01G109000.1 | Wheat | peroxisome | 71.31 | 87.11 |
| VIT_09s0002g00350.t01 | Wine grape | endoplasmic reticulum | 96.62 | 78.16 |
| Zm00001d048403_P001 | Maize | extracellular | 93.25 | 75.43 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 40.08 | 38.0 |
| AT5G66140.1 | Thale cress | cytosol | 37.97 | 36.0 |
| AT4G15165.1 | Thale cress | cytosol | 31.22 | 35.58 |
| AT3G51260.1 | Thale cress | cytosol | 37.13 | 35.2 |
| AT1G79210.1 | Thale cress | cytosol | 33.33 | 33.62 |
| AT1G16470.2 | Thale cress | cytosol | 33.33 | 33.62 |
| AT5G35590.1 | Thale cress | cytosol | 33.33 | 32.11 |
| AT5G42790.1 | Thale cress | cytosol | 36.71 | 31.3 |
| AT1G47250.1 | Thale cress | cytosol | 35.87 | 30.69 |
| AT2G05840.1 | Thale cress | cytosol | 31.22 | 30.08 |
| AT2G27020.2 | Thale cress | cytoskeleton, cytosol, nucleus | 27.85 | 18.8 |
Protein Annotations
| MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | EntrezGene:820649 | UniProt:A0A178VCX2 | ProteinID:AEE75498.1 | EMBL:AF043525 |
| EMBL:AF370245 | ArrayExpress:AT3G14290 | EnsemblPlantsGene:AT3G14290 | RefSeq:AT3G14290 | TAIR:AT3G14290 | RefSeq:AT3G14290-TAIR-G |
| EnsemblPlants:AT3G14290.1 | TAIR:AT3G14290.1 | EMBL:AY062970 | ProteinID:BAB01035.1 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0004518 | GO:GO:0004540 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005839 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006508 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0019773 | GO:GO:0022626 | GO:GO:0042788 | GO:GO:0043161 | GO:GO:0051603 |
| GO:GO:0090501 | InterPro:IPR023332 | InterPro:IPR029055 | RefSeq:NP_188046.1 | InterPro:Ntn_hydrolases_N | ProteinID:OAP02722.1 |
| Symbol:PAE2 | PFAM:PF00227 | PFAM:PF10584 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_alpha_type_5 |
| InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | UniProt:Q42134 | SMART:SM00948 | SUPFAM:SSF56235 | MEROPS:T01.995 |
| UniParc:UPI00000016E8 | EMBL:Z26556 | : | : | : | : |
Description
PAE2Proteasome subunit alpha type-5-B [Source:UniProtKB/Swiss-Prot;Acc:Q42134]
Coordinates
chr3:+:4764024..4766609
Molecular Weight (calculated)
25978.7 Da
IEP (calculated)
4.410
GRAVY (calculated)
-0.208
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDITLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDITLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.