Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33398 | Canola | cytosol, extracellular | 96.75 | 96.75 |
| Bra015170.1-P | Field mustard | cytosol | 96.75 | 96.75 |
| CDY18045 | Canola | cytosol | 96.75 | 96.75 |
| CDY50408 | Canola | cytosol, extracellular | 95.53 | 96.31 |
| Bra013157.1-P | Field mustard | cytosol | 95.53 | 95.53 |
| AT5G35590.1 | Thale cress | cytosol | 91.46 | 91.46 |
| Solyc12g009140.1.1 | Tomato | extracellular | 89.84 | 89.84 |
| PGSC0003DMT400007520 | Potato | cytosol, extracellular | 89.84 | 89.84 |
| GSMUA_Achr10P... | Banana | cytosol | 89.43 | 89.43 |
| CDX93103 | Canola | cytosol | 95.12 | 88.97 |
| KRH55422 | Soybean | cytosol, endoplasmic reticulum | 88.21 | 88.21 |
| KRH26034 | Soybean | nucleus | 88.21 | 88.21 |
| VIT_09s0002g00980.t01 | Wine grape | cytosol | 87.8 | 87.8 |
| GSMUA_Achr6P11610_001 | Banana | cytosol | 86.99 | 86.99 |
| Zm00001d027896_P001 | Maize | cytosol, extracellular, mitochondrion | 85.37 | 85.37 |
| Zm00001d048271_P001 | Maize | cytosol, extracellular | 84.96 | 84.96 |
| EER92751 | Sorghum | cytosol | 84.55 | 84.55 |
| Os03t0180400-01 | Rice | cytosol | 84.55 | 84.55 |
| TraesCS4D01G295500.1 | Wheat | cytosol, golgi, plastid, unclear | 83.74 | 83.74 |
| TraesCS4A01G008300.1 | Wheat | cytosol, golgi, plastid, unclear | 83.74 | 83.74 |
| HORVU4Hr1G076770.2 | Barley | cytosol | 84.15 | 73.4 |
| GSMUA_Achr3P02110_001 | Banana | cytosol | 34.55 | 62.04 |
| KXG36677 | Sorghum | plastid | 61.79 | 55.47 |
| TraesCS2D01G177600.1 | Wheat | mitochondrion | 54.88 | 50.37 |
| TraesCS2A01G170100.1 | Wheat | mitochondrion | 54.47 | 50.0 |
| Os07t0614100-01 | Rice | cytosol | 51.22 | 49.8 |
| TraesCS2B01G196400.1 | Wheat | mitochondrion | 53.66 | 45.36 |
| Zm00001d022131_P001 | Maize | mitochondrion | 54.06 | 41.82 |
| AT3G51260.1 | Thale cress | cytosol | 35.37 | 34.8 |
| AT1G16470.2 | Thale cress | cytosol | 32.93 | 34.47 |
| AT5G66140.1 | Thale cress | cytosol | 34.96 | 34.4 |
| AT1G79210.1 | Thale cress | cytosol | 32.52 | 34.04 |
| AT3G14290.1 | Thale cress | cytosol | 30.08 | 31.22 |
| AT1G53850.1 | Thale cress | cytosol | 29.67 | 30.8 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 30.89 | 30.4 |
| AT4G15165.1 | Thale cress | cytosol | 25.2 | 29.81 |
| AT1G47250.1 | Thale cress | cytosol | 31.71 | 28.16 |
| AT5G42790.1 | Thale cress | cytosol | 30.89 | 27.34 |
| AT2G27020.2 | Thale cress | cytoskeleton, cytosol, nucleus | 28.46 | 19.94 |
Protein Annotations
| MapMan:19.2.6.1.1.1 | Gene3D:3.60.20.10 | EntrezGene:815135 | UniProt:A0A178VUX1 | ProteinID:AAC95161.1 | ProteinID:AEC05979.1 |
| EMBL:AF043519 | ArrayExpress:AT2G05840 | EnsemblPlantsGene:AT2G05840 | RefSeq:AT2G05840 | TAIR:AT2G05840 | RefSeq:AT2G05840-TAIR-G |
| EnsemblPlants:AT2G05840.1 | TAIR:AT2G05840.1 | EMBL:AY052679 | EMBL:AY143829 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005839 |
| GO:GO:0005840 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0022626 |
| GO:GO:0042788 | GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | RefSeq:NP_178641.1 | InterPro:Ntn_hydrolases_N |
| UniProt:O81147 | ProteinID:OAP09618.1 | Symbol:PAA2 | PFAM:PF00227 | PFAM:PF10584 | PO:PO:0000005 |
| PO:PO:0000293 | PO:PO:0001170 | PO:PO:0009001 | ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF11 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | InterPro:Proteasome_subunit_alpha6 | SMART:SM00948 |
| SUPFAM:SSF56235 | UniParc:UPI0000000D69 | : | : | : | : |
Description
PAA2Proteasome subunit alpha type-6-B [Source:UniProtKB/Swiss-Prot;Acc:O81147]
Coordinates
chr2:+:2234019..2236470
Molecular Weight (calculated)
27351.6 Da
IEP (calculated)
5.972
GRAVY (calculated)
-0.283
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGSGAGYD RHITIFSPEG RLFQVEYAFK AVKAAGITSI GVRGKDSVCV VTQKKVPDKL LDQSSVSHLF PVTKYLGLLA TGMTADSRSL VQQARNEAAE
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVVAMV LGIDEERGPL LYKCDPAGHF YGHKATSAGM KEQEAVNFLE KKMKENPAFT YDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RADDPLFRSL RTEEIDEHLT AISERD
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVVAMV LGIDEERGPL LYKCDPAGHF YGHKATSAGM KEQEAVNFLE KKMKENPAFT YDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RADDPLFRSL RTEEIDEHLT AISERD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.