Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G51260.1 | Thale cress | cytosol | 95.2 | 95.2 |
| KRH69759 | Soybean | endoplasmic reticulum, nucleus | 92.0 | 92.37 |
| KRH08047 | Soybean | cytosol, endoplasmic reticulum, nucleus | 92.0 | 92.37 |
| VIT_04s0023g03690.t01 | Wine grape | cytosol | 91.6 | 91.97 |
| VIT_03s0038g02300.t01 | Wine grape | cytosol | 91.6 | 91.97 |
| PGSC0003DMT400015849 | Potato | cytosol | 91.6 | 91.97 |
| GSMUA_Achr2P03470_001 | Banana | cytosol | 91.6 | 91.97 |
| Solyc01g111450.2.1 | Tomato | plastid | 91.6 | 91.97 |
| GSMUA_Achr11P... | Banana | cytosol | 90.8 | 91.16 |
| Os08t0548900-01 | Rice | plastid | 90.0 | 90.36 |
| Os09t0538200-01 | Rice | cytosol, plastid | 90.0 | 90.36 |
| EER97100 | Sorghum | cytosol | 90.0 | 90.36 |
| Zm00001d022629_P001 | Maize | cytosol | 89.6 | 89.96 |
| Zm00001d053217_P001 | Maize | cytosol, extracellular | 89.2 | 89.56 |
| TraesCS7A01G272000.1 | Wheat | cytosol | 89.2 | 89.56 |
| TraesCS7B01G170000.1 | Wheat | cytosol, golgi, plastid, unclear | 89.2 | 89.56 |
| TraesCS7D01G272300.1 | Wheat | cytosol | 89.2 | 89.56 |
| Zm00001d006235_P001 | Maize | cytosol, extracellular | 89.2 | 89.56 |
| EES15231 | Sorghum | cytosol | 88.8 | 89.16 |
| TraesCS5A01G329300.1 | Wheat | cytosol | 88.4 | 88.75 |
| TraesCS5B01G329400.1 | Wheat | cytosol | 88.4 | 88.75 |
| HORVU5Hr1G083350.1 | Barley | cytosol | 88.4 | 88.75 |
| HORVU7Hr1G057390.2 | Barley | cytosol, nucleus, plastid | 88.4 | 77.82 |
| CDX81411 | Canola | mitochondrion, plastid | 70.8 | 62.54 |
| AT1G53850.1 | Thale cress | cytosol | 36.8 | 38.82 |
| AT1G16470.2 | Thale cress | cytosol | 36.0 | 38.3 |
| AT1G79210.1 | Thale cress | cytosol | 36.0 | 38.3 |
| AT3G14290.1 | Thale cress | cytosol | 36.0 | 37.97 |
| AT5G35590.1 | Thale cress | cytosol | 35.6 | 36.18 |
| AT2G05840.1 | Thale cress | cytosol | 34.4 | 34.96 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 34.8 | 34.8 |
| AT4G15165.1 | Thale cress | cytosol | 28.0 | 33.65 |
| AT1G47250.1 | Thale cress | cytosol | 36.4 | 32.85 |
| AT5G42790.1 | Thale cress | cytosol | 35.6 | 32.01 |
| AT2G27020.2 | Thale cress | cytoskeleton, cytosol, nucleus | 26.8 | 19.09 |
Protein Annotations
| MapMan:19.2.6.1.1.4 | Gene3D:3.60.20.10 | EntrezGene:824289 | EntrezGene:836746 | ProteinID:AED98164.1 | ProteinID:AEE78769.1 |
| EMBL:AF043522 | EMBL:AF043523 | EMBL:AK227551 | ArrayExpress:AT5G66140 | EnsemblPlantsGene:AT5G66140 | RefSeq:AT5G66140 |
| TAIR:AT5G66140 | RefSeq:AT5G66140-TAIR-G | EnsemblPlants:AT5G66140.1 | TAIR:AT5G66140.1 | EMBL:AY042820 | EMBL:AY052321 |
| EMBL:AY061899 | EMBL:AY081448 | EMBL:AY087443 | Unigene:At.24248 | ProteinID:BAB10419.1 | EMBL:BT004572 |
| ProteinID:CAB62648.1 | ncoils:Coil | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 |
| GO:GO:0004298 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005819 | GO:GO:0005829 |
| GO:GO:0005839 | GO:GO:0005840 | GO:GO:0005856 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009507 | GO:GO:0009524 | GO:GO:0009536 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0022626 |
| GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | RefSeq:NP_190694.1 | RefSeq:NP_201415.1 | InterPro:Ntn_hydrolases_N |
| UniProt:O24616 | ProteinID:OAP06742.1 | Symbol:PAD2 | PFAM:PF00227 | PFAM:PF10584 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00388 |
| PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF106 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b |
| SMART:SM00948 | SUPFAM:SSF56235 | UniParc:UPI0000132434 | EMBL:X66825 | EMBL:Y13179 | EMBL:Y13180 |
| EMBL:Z17987 | SEG:seg | : | : | : | : |
Description
PAD2Proteasome subunit alpha type-7-B [Source:UniProtKB/Swiss-Prot;Acc:O24616]
Coordinates
chr5:-:26437170..26438771
Molecular Weight (calculated)
27325.6 Da
IEP (calculated)
8.969
GRAVY (calculated)
-0.314
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD TVVLAVEKKS TPKLQDSRSA RKIVSLDNHI ALACAGLKAD ARVLINKARI ECQSHRLTLE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY SRLPSLYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SSGQETIKLA IRALLEVVES
201: GGKNIEVAVM TREETGLRQL EEAEIDAIVA KIEAEKAAAE AAKKGPPKET
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY SRLPSLYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SSGQETIKLA IRALLEVVES
201: GGKNIEVAVM TREETGLRQL EEAEIDAIVA KIEAEKAAAE AAKKGPPKET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.