Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51260.1 | EER93592 | AT1G14920.1 | 21798944 |
| AT3G51260.1 | EER93592 | AT2G01570.1 | 21798944 |
| AT3G51260.1 | KXG21735 | AT5G05410.1 | 18552202 |
| AT3G51260.1 | EES11990 | AT5G22310.1 | 21798944 |
| AT3G51260.1 | KXG30263 | AT5G22310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053217_P001 | Maize | cytosol, extracellular | 97.99 | 97.99 |
| Os08t0548900-01 | Rice | plastid | 97.19 | 97.19 |
| TraesCS7D01G272300.1 | Wheat | cytosol | 96.39 | 96.39 |
| TraesCS7B01G170000.1 | Wheat | cytosol, golgi, plastid, unclear | 96.39 | 96.39 |
| TraesCS7A01G272000.1 | Wheat | cytosol | 96.39 | 96.39 |
| EER97100 | Sorghum | cytosol | 96.39 | 96.39 |
| TraesCS5B01G329400.1 | Wheat | cytosol | 94.38 | 94.38 |
| TraesCS5A01G329300.1 | Wheat | cytosol | 94.38 | 94.38 |
| HORVU5Hr1G083350.1 | Barley | cytosol | 94.38 | 94.38 |
| GSMUA_Achr2P03470_001 | Banana | cytosol | 91.57 | 91.57 |
| GSMUA_Achr11P... | Banana | cytosol | 90.76 | 90.76 |
| VIT_03s0038g02300.t01 | Wine grape | cytosol | 90.36 | 90.36 |
| VIT_04s0023g03690.t01 | Wine grape | cytosol | 89.96 | 89.96 |
| KRH08047 | Soybean | cytosol, endoplasmic reticulum, nucleus | 89.96 | 89.96 |
| KRH69759 | Soybean | endoplasmic reticulum, nucleus | 89.56 | 89.56 |
| AT5G66140.1 | Thale cress | cytosol | 89.16 | 88.8 |
| Solyc01g111450.2.1 | Tomato | plastid | 88.35 | 88.35 |
| PGSC0003DMT400015849 | Potato | cytosol | 88.35 | 88.35 |
| CDX73737 | Canola | cytosol, extracellular | 88.35 | 88.0 |
| CDX77988 | Canola | cytosol, extracellular | 88.35 | 88.0 |
| Bra036824.1-P | Field mustard | cytosol | 88.35 | 88.0 |
| Bra012861.1-P | Field mustard | cytosol | 88.35 | 88.0 |
| CDY29009 | Canola | cytosol | 87.95 | 87.6 |
| AT3G51260.1 | Thale cress | cytosol | 87.95 | 87.6 |
| CDX90655 | Canola | cytosol | 87.95 | 87.6 |
| HORVU7Hr1G057390.2 | Barley | cytosol, nucleus, plastid | 95.58 | 83.8 |
| CDX81411 | Canola | mitochondrion, plastid | 66.67 | 58.66 |
| OQU93221 | Sorghum | cytosol | 37.75 | 39.66 |
| EES10115 | Sorghum | peroxisome | 37.75 | 39.66 |
| EER94765 | Sorghum | cytosol | 36.14 | 38.3 |
| EES05472 | Sorghum | cytosol | 35.74 | 37.87 |
| EER92751 | Sorghum | cytosol | 34.94 | 35.37 |
| OQU75904 | Sorghum | cytosol | 34.94 | 34.8 |
| EES01630 | Sorghum | cytosol | 26.1 | 31.86 |
| EER97635 | Sorghum | cytosol | 30.12 | 30.12 |
| KXG36677 | Sorghum | plastid | 32.13 | 29.2 |
| EES04466 | Sorghum | cytosol | 30.92 | 28.52 |
Protein Annotations
| MapMan:19.2.6.1.1.4 | Gene3D:3.60.20.10 | EntrezGene:8057847 | UniProt:C5YH32 | ncoils:Coil | EnsemblPlants:EES15231 |
| ProteinID:EES15231 | ProteinID:EES15231.1 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 |
| GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0051603 |
| InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 |
| PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF106 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b |
| SMART:SM00948 | EnsemblPlantsGene:SORBI_3007G177200 | SUPFAM:SSF56235 | unigene:Sbi.14664 | UniParc:UPI0001A87E6A | RefSeq:XP_002445736.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:61097273..61099561
Molecular Weight (calculated)
27289.5 Da
IEP (calculated)
8.184
GRAVY (calculated)
-0.355
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGVD TVVLGVEKKS TPKLQDSRSV RKIASLDTHI ALACAGLKAD ARVLINRARV ECQSHRLTVE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TQKPALYQTD PSGTFSAWKA NATGRNSNSM REFLEKNYKE TSGKETIKLA IKALLEVVES
201: GGKNIEIAVM THKDGLRELE EAEIDEYVAE IEAEKAAAEA AKKGAPREN
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TQKPALYQTD PSGTFSAWKA NATGRNSNSM REFLEKNYKE TSGKETIKLA IKALLEVVES
201: GGKNIEIAVM THKDGLRELE EAEIDEYVAE IEAEKAAAEA AKKGAPREN
001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD TVVLAVEKKS TPKLQDSRSA RKIVSLDNHI ALACAGLKAD ARVLINKARI ECQSHRLTLE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY SRLPSLYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SSGQETIKLA IRALLEVVES
201: GGKNIEVAVM TREETGLRQL EEAEIDAIVA KIEAEKAAAE AAKKGPPKET
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY SRLPSLYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SSGQETIKLA IRALLEVVES
201: GGKNIEVAVM TREETGLRQL EEAEIDAIVA KIEAEKAAAE AAKKGPPKET
Arabidopsis Description
PAD2Proteasome subunit alpha type-7-B [Source:UniProtKB/Swiss-Prot;Acc:O24616]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.