Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045194_P001 | Maize | extracellular | 98.8 | 98.8 |
| Zm00001d036319_P001 | Maize | cytosol | 97.6 | 97.6 |
| Os06t0167600-01 | Rice | cytosol | 96.0 | 96.0 |
| TraesCS7A01G130500.1 | Wheat | plastid | 95.6 | 95.6 |
| Os06t0176000-01 | Rice | cytosol | 95.6 | 95.6 |
| Os06t0177100-01 | Rice | plastid | 95.6 | 95.6 |
| TraesCS7D01G129900.1 | Wheat | cytosol | 95.6 | 95.6 |
| TraesCS7B01G030800.1 | Wheat | plastid | 95.2 | 95.2 |
| KRH49455 | Soybean | endoplasmic reticulum, nucleus | 85.2 | 85.2 |
| Solyc02g081700.1.1 | Tomato | extracellular | 84.4 | 85.08 |
| KRH65617 | Soybean | nucleus | 84.8 | 84.8 |
| KRH00322 | Soybean | cytosol | 84.8 | 84.8 |
| KRH76017 | Soybean | cytosol | 84.8 | 84.8 |
| CDY37382 | Canola | cytosol | 68.0 | 84.58 |
| HORVU7Hr1G027220.2 | Barley | cytosol | 89.6 | 84.53 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 84.4 | 84.4 |
| CDY69258 | Canola | cytosol, mitochondrion | 70.0 | 84.13 |
| Bra023851.1-P | Field mustard | cytosol | 84.0 | 84.0 |
| GSMUA_Achr7P21280_001 | Banana | cytosol | 76.8 | 83.84 |
| CDY66240 | Canola | extracellular | 68.0 | 83.74 |
| Bra031328.1-P | Field mustard | cytosol, mitochondrion | 83.6 | 83.6 |
| VIT_10s0042g00070.t01 | Wine grape | cytosol | 83.6 | 83.6 |
| PGSC0003DMT400049388 | Potato | cytosol | 83.2 | 83.53 |
| CDY39501 | Canola | cytosol, mitochondrion | 66.8 | 83.08 |
| CDY19309 | Canola | extracellular | 66.4 | 82.59 |
| GSMUA_Achr6P02000_001 | Banana | cytosol | 63.2 | 81.44 |
| AT4G15165.1 | Thale cress | cytosol | 67.6 | 81.25 |
| GSMUA_Achr4P00300_001 | Banana | cytosol | 84.4 | 79.03 |
| Bra037085.1-P | Field mustard | cytosol | 85.2 | 69.16 |
| OQU93221 | Sorghum | cytosol | 38.4 | 40.51 |
| EES10115 | Sorghum | peroxisome | 38.0 | 40.08 |
| EES05472 | Sorghum | cytosol | 33.6 | 35.74 |
| EER94765 | Sorghum | cytosol | 33.2 | 35.32 |
| EES15231 | Sorghum | cytosol | 34.8 | 34.94 |
| EES01630 | Sorghum | cytosol | 28.4 | 34.8 |
| EER97100 | Sorghum | cytosol | 34.4 | 34.54 |
| EER92751 | Sorghum | cytosol | 31.2 | 31.71 |
| EER97635 | Sorghum | cytosol | 31.2 | 31.33 |
| EES04466 | Sorghum | cytosol | 28.8 | 26.67 |
| KXG36677 | Sorghum | plastid | 28.0 | 25.55 |
Protein Annotations
| MapMan:19.2.6.1.1.3 | Gene3D:3.60.20.10 | UniProt:A0A1W0VRK7 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 |
| GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | EnsemblPlants:OQU75904 | ProteinID:OQU75904 |
| ProteinID:OQU75904.1 | PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF13 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | InterPro:Proteasome_subunit_alpha4 | SMART:SM00948 |
| EnsemblPlantsGene:SORBI_3010G054200 | SUPFAM:SSF56235 | UniParc:UPI0001FCC9D9 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:4257416..4259636
Molecular Weight (calculated)
26997.3 Da
IEP (calculated)
6.933
GRAVY (calculated)
-0.163
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSALGILAA DGVVLVGEKK VTSKLLQTSR SAEKMYKIDS HLACAVAGIM SDANILINTA RLHAQRYALS
101: YQEPIPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANSQA AQSMLKQDYK DGLTREEAVA LALKVLSKTM
201: DSTSLTAEKL ELAEVFLQPG TGDVQYQVCS PEALGKLLAK SGLTQPTPDA
101: YQEPIPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANSQA AQSMLKQDYK DGLTREEAVA LALKVLSKTM
201: DSTSLTAEKL ELAEVFLQPG TGDVQYQVCS PEALGKLLAK SGLTQPTPDA
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
Arabidopsis Description
PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.