CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
peroxisome 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10115	Sorghum	peroxisome	99.58	99.58
Os11t0615700-01	Rice	peroxisome	98.31	98.31
TraesCS5B01G114000.1	Wheat	golgi, plastid, unclear	97.47	97.47
TraesCS4D01G157700.1	Wheat	peroxisome	96.62	96.62
TraesCS4B01G151700.1	Wheat	golgi, unclear	96.62	96.62
HORVU4Hr1G040770.1	Barley	cytosol	96.2	96.2
GSMUA_Achr11P...	Banana	peroxisome	96.2	96.2
GSMUA_Achr10P...	Banana	peroxisome	96.2	96.2
KRG90710	Soybean	peroxisome	95.78	95.78
KRH69234	Soybean	endoplasmic reticulum	95.78	95.78
KRH36037	Soybean	endoplasmic reticulum, nucleus	95.78	95.78
TraesCS4A01G167300.1	Wheat	peroxisome	95.36	95.36
KRH31817	Soybean	cytosol	94.94	94.94
Solyc02g070510.2.1	Tomato	nucleus	94.51	94.51
PGSC0003DMT400054523	Potato	cytosol	94.51	94.51
AT1G53850.1	Thale cress	cytosol	94.09	94.09
Bra030921.1-P	Field mustard	cytosol	94.09	94.09
PGSC0003DMT400024982	Potato	cytosol, nucleus, peroxisome	93.67	93.67
Solyc08g016510.2.1	Tomato	extracellular	93.67	93.67
AT3G14290.1	Thale cress	cytosol	93.67	93.67
TraesCS5D01G121300.1	Wheat	peroxisome	90.3	90.3
CDY08208	Canola	peroxisome	92.41	89.75
TraesCS5A01G109000.1	Wheat	peroxisome	72.57	88.66
CDY51800	Canola	peroxisome	92.41	87.6
Zm00001d048403_P001	Maize	extracellular	99.58	80.55
CDY02493	Canola	mitochondrion	94.09	79.64
CDY25683	Canola	cytosol, plastid	94.09	78.8
VIT_09s0002g00350.t01	Wine grape	endoplasmic reticulum	95.78	77.47
GSMUA_Achr6P10850_001	Banana	mitochondrion	91.56	71.15
OQU75904	Sorghum	cytosol	40.51	38.4
EES15231	Sorghum	cytosol	39.66	37.75
EER97100	Sorghum	cytosol	39.24	37.35
EES05472	Sorghum	cytosol	34.18	34.47
EER94765	Sorghum	cytosol	33.76	34.04
EES01630	Sorghum	cytosol	27.43	31.86
EES04466	Sorghum	cytosol	36.29	31.85
EER92751	Sorghum	cytosol	32.07	30.89
EER97635	Sorghum	cytosol	29.11	27.71
KXG36677	Sorghum	plastid	28.27	24.45

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	EntrezGene:8080549	UniProt:A0A1Z5SBB8	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019773	GO:GO:0043161	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
EnsemblPlants:OQU93221	ProteinID:OQU93221	ProteinID:OQU93221.1	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388
PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5	InterPro:Proteasome_asu_N
InterPro:Proteasome_sua/b	SMART:SM00948	EnsemblPlantsGene:SORBI_3001G502200	SUPFAM:SSF56235	UniParc:UPI0001A82B47	RefSeq:XP_002465846.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:77089484..77095343

Molecular Weight (calculated)

25979.7 Da

IEP (calculated)

4.428

GRAVY (calculated)

-0.221

Length

237 amino acids

Sequence
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGL KTKDGVVLAV EKRVTSPLLE PSSVEKIMEI DEHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE SSTQAICDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQYNKELTLE EAETIALSIL
201: KQVMEEKVTP NNVDIAKVAP KYHLYTPAEV EAVIARL

Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL

Arabidopsis Description

PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.