Factsheet for GSMUA_Achr6P10850_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	peroxisome	73.11	94.09
GSMUA_Achr11P...	Banana	peroxisome	73.11	94.09
Os11t0615700-01	Rice	peroxisome	71.48	91.98
Zm00001d027688_P002	Maize	peroxisome	71.48	91.98
EES10115	Sorghum	peroxisome	71.48	91.98
OQU93221	Sorghum	cytosol	71.15	91.56
TraesCS5B01G114000.1	Wheat	golgi, plastid, unclear	70.82	91.14
HORVU4Hr1G040770.1	Barley	cytosol	70.49	90.72
TraesCS4B01G151700.1	Wheat	golgi, unclear	70.16	90.3
TraesCS4D01G157700.1	Wheat	peroxisome	70.16	90.3
TraesCS4A01G167300.1	Wheat	peroxisome	69.84	89.87
TraesCS5D01G121300.1	Wheat	peroxisome	65.57	84.39
TraesCS5A01G109000.1	Wheat	peroxisome	53.44	84.02
VIT_09s0002g00350.t01	Wine grape	endoplasmic reticulum	73.11	76.11
Zm00001d048403_P001	Maize	extracellular	71.8	74.74
GSMUA_Achr7P21280_001	Banana	cytosol	29.18	38.86
GSMUA_Achr11P...	Banana	cytosol	28.85	35.34
GSMUA_Achr2P03470_001	Banana	cytosol	28.52	34.94
GSMUA_Achr4P00300_001	Banana	cytosol	30.16	34.46
GSMUA_Achr6P02000_001	Banana	cytosol	21.31	33.51
GSMUA_Achr8P13980_001	Banana	cytosol	25.25	32.77
GSMUA_Achr5P19360_001	Banana	cytosol	25.25	32.77
GSMUA_Achr10P...	Banana	cytosol	27.54	31.7
GSMUA_Achr6P11610_001	Banana	cytosol	22.3	27.64
GSMUA_Achr10P...	Banana	cytosol	21.97	27.24
GSMUA_Achr8P23960_001	Banana	cytosol	20.66	25.3
GSMUA_Achr4P10040_001	Banana	cytosol	20.66	25.3
GSMUA_Achr3P02110_001	Banana	cytosol	8.85	19.71

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0043161
GO:GO:0051603	EnsemblPlantsGene:GSMUA_Achr6G10850_001	EnsemblPlants:GSMUA_Achr6P10850_001	EnsemblPlants:GSMUA_Achr6T10850_001	InterPro:IPR023332	InterPro:IPR029055
UniProt:M0T5Y4	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475
PANTHER:PTHR11599	PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b
SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI000296895A	:	:	:

Description

Proteasome subunit alpha type-5 [Source:GMGC_GENE;Acc:GSMUA_Achr6G10850_001]

Coordinates

chr6:-:7228296..7233683

Molecular Weight (calculated)

33525.1 Da

IEP (calculated)

5.929

GRAVY (calculated)

-0.196

Length

305 amino acids

Sequence
(BLAST)

001: MTSRPIRTCR SRATMCLLEK CVLLACVRGS HVRGAHRELC SPAAADPKST LKKRRSPPPV FASLSLSHRI LEMFLTRTEY YRGVNTFSPE GRLFQVEYAI
101: EAIKLGSTAI GLRTNEGVVL AVEKRVTSPL LEPSSVEKIM EIDEHIGCAM SGLIADARTL VEYARNHRFS YGEPMTVEST TQALCDLALR FGEGDEESMS
201: QPFGVSLLIA GHDENGPSLY YTDPSGTFWQ CSAKAIGSGS EGADSSLQEQ YNKDLTLQEA ETIALSISKQ VMEEKVTPNN LDIARVAPTY HLYTPTEVEA
301: VIARL

Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL

Arabidopsis Description

PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.