Factsheet for GSMUA_Achr4P10040_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P23960_001	Banana	cytosol	96.39	96.39
Solyc10g077030.1.1	Tomato	extracellular	93.17	93.17
PGSC0003DMT400018521	Potato	cytosol	92.77	92.77
PGSC0003DMT400072226	Potato	cytosol	92.37	92.37
VIT_08s0040g00410.t01	Wine grape	cytosol	91.57	91.57
Solyc10g081130.1.1	Tomato	extracellular, plastid	91.57	91.57
KRG94269	Soybean	cytosol	90.76	90.76
Bra034316.1-P	Field mustard	cytosol	89.56	89.56
CDY48190	Canola	cytosol	89.56	89.56
CDY04473	Canola	cytosol	89.56	89.56
CDX71476	Canola	cytosol	89.16	89.16
CDX77059	Canola	cytosol	88.75	88.75
Os01t0811100-01	Rice	cytosol	88.35	88.35
EER97635	Sorghum	cytosol	87.55	87.55
EES01630	Sorghum	cytosol	71.49	87.25
TraesCS1B01G319100.1	Wheat	cytosol	87.15	87.15
TraesCS1D01G307800.1	Wheat	cytosol	87.15	87.15
TraesCS5A01G287400.1	Wheat	cytosol, golgi, unclear	87.15	87.15
TraesCS5B01G286900.1	Wheat	cytosol	87.15	87.15
TraesCS5D01G295300.1	Wheat	cytosol	87.15	87.15
Os05t0490800-01	Rice	cytosol, plasma membrane	87.15	87.15
TraesCS1A01G308400.1	Wheat	cytosol	86.75	86.75
HORVU0Hr1G001180.1	Barley	cytosol	86.75	86.75
HORVU1Hr1G068490.1	Barley	cytosol	86.75	86.75
Zm00001d012546_P002	Maize	cytosol	87.95	85.55
Zm00001d043137_P004	Maize	cytosol	87.15	84.44
KRH57704	Soybean	cytosol, endoplasmic reticulum	84.74	80.84
Zm00001d022316_P001	Maize	cytosol	87.95	79.64
HORVU5Hr1G076600.1	Barley	plastid	73.09	70.27
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	89.56	63.53
Zm00001d007038_P001	Maize	cytosol	88.35	56.7
GSMUA_Achr8P13980_001	Banana	cytosol	30.12	31.91
GSMUA_Achr5P19360_001	Banana	cytosol	29.72	31.49
GSMUA_Achr7P21280_001	Banana	cytosol	28.51	31.0
GSMUA_Achr2P03470_001	Banana	cytosol	29.32	29.32
GSMUA_Achr11P...	Banana	cytosol	28.92	28.92
GSMUA_Achr10P...	Banana	cytosol	30.52	28.68
GSMUA_Achr6P02000_001	Banana	cytosol	22.09	28.35
GSMUA_Achr10P...	Banana	cytosol	27.71	28.05
GSMUA_Achr6P11610_001	Banana	cytosol	27.71	28.05
GSMUA_Achr11P...	Banana	peroxisome	26.51	27.85
GSMUA_Achr10P...	Banana	peroxisome	26.51	27.85
GSMUA_Achr4P00300_001	Banana	cytosol	27.71	25.84
GSMUA_Achr3P02110_001	Banana	cytosol	12.45	22.63
GSMUA_Achr6P10850_001	Banana	mitochondrion	25.3	20.66

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603
EnsemblPlantsGene:GSMUA_Achr4G10040_001	EnsemblPlants:GSMUA_Achr4P10040_001	EnsemblPlants:GSMUA_Achr4T10040_001	InterPro:IPR023332	InterPro:IPR029055	UniProt:M0SMM1
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF103	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha3	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948
SUPFAM:SSF56235	UniParc:UPI000296A983	SEG:seg	:	:	:

Description

Proteasome subunit alpha type-3 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10040_001]

Coordinates

chr4:-:7350210..7358737

Molecular Weight (calculated)

27267.6 Da

IEP (calculated)

6.167

GRAVY (calculated)

-0.196

Length

249 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQIEYAAKA VDNSGTVIGI KCKDGIVMGV EKLISSKMML AGSNRRIHAV HRHSGMAVAG LAADGRQIVA RAKSEATSYE
101: RVYGDPIPVK ELADHVASYV HLCTLYWWLR PFGCGIILGG YDRDGPQLYT IEPSGISYRY FGAAIGKGRQ AAKTEIEKLK LSEMTCREGI IEVAKIIYGV
201: HDEAKDKAFE LEMSWVCDES NRQHQKVPDD LLEEAKAAAK AALEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.2 )
(BLAST)

001: MWLIIQNYTK EENHLKIFTI PLKDYQRMGQ IIILIKPVNN RIDPPDKTTR IVLISNPESD GAPKIWLVSG LRTKKTPFFD LSLNHSTKKK SEKSQRKKKS
101: RKMSSIGTGY DLSVTTFSPD GRVFQIEYAA KAVDNSGTVV GIKCKDGIVM GVEKLIASKM MLPGSNRRIH SVHRHAGMAV AGLAADGRQI VARAKSEARS
201: YESVYGDAVP VKELSERVAS YVHLCTLYWW LRPFGCGVIL GGYDRDGPQL YMIEPSGISY RYFGAAIGKG KQAAKTEIEK LNLSEMTCKE GVIEVAKIIY
301: KLHDEAKDKA FELEMSWICE ESKREHQKVP DDLLEEAKTA AKTALEEMDA D

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.