Factsheet for Zm00001d022316_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97635	Sorghum	cytosol	89.09	98.39
Os01t0811100-01	Rice	cytosol	88.36	97.59
Zm00001d012546_P002	Maize	cytosol	88.36	94.92
Zm00001d043137_P004	Maize	cytosol	88.0	94.16
PGSC0003DMT400018521	Potato	cytosol	81.09	89.56
Solyc10g077030.1.1	Tomato	extracellular	80.73	89.16
PGSC0003DMT400072226	Potato	cytosol	80.36	88.75
GSMUA_Achr8P23960_001	Banana	cytosol	80.0	88.35
Solyc10g081130.1.1	Tomato	extracellular, plastid	79.64	87.95
GSMUA_Achr4P10040_001	Banana	cytosol	79.64	87.95
VIT_08s0040g00410.t01	Wine grape	cytosol	78.91	87.15
KRG94269	Soybean	cytosol	78.55	86.75
CDY48190	Canola	cytosol	76.0	83.94
CDY04473	Canola	cytosol	76.0	83.94
Bra034316.1-P	Field mustard	cytosol	76.0	83.94
CDX71476	Canola	cytosol	75.64	83.53
CDX77059	Canola	cytosol	75.27	83.13
KRH57704	Soybean	cytosol, endoplasmic reticulum	73.45	77.39
Zm00001d007038_P001	Maize	cytosol	92.73	65.72
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	77.45	60.68
Zm00001d036319_P001	Maize	cytosol	29.09	32.0
Zm00001d045194_P001	Maize	extracellular	28.73	31.6
Zm00001d017336_P007	Maize	cytosol	27.27	31.25
Zm00001d017338_P006	Maize	cytosol	27.27	31.25
Zm00001d053217_P001	Maize	cytosol, extracellular	27.64	30.52
Zm00001d022629_P001	Maize	cytosol	27.64	30.52
Zm00001d006235_P001	Maize	cytosol, extracellular	27.27	30.12
Zm00001d027688_P002	Maize	peroxisome	25.82	29.96
Zm00001d034938_P001	Maize	cytosol	10.55	29.0
Zm00001d048271_P001	Maize	cytosol, extracellular	25.82	28.86
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	25.45	28.46
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	28.0	28.1
Zm00001d048403_P001	Maize	extracellular	25.82	24.23
Zm00001d017340_P002	Maize	cytosol	14.55	21.05
Zm00001d022131_P001	Maize	mitochondrion	19.27	16.67
Zm00001d051211_P008	Maize	cytosol	27.27	15.96

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	UniProt:A0A1D6IL23	ncoils:Coil	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	ProteinID:ONM60102.1
PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF101
InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI00084482E0
EnsemblPlantsGene:Zm00001d022316	EnsemblPlants:Zm00001d022316_P001	EnsemblPlants:Zm00001d022316_T001	SEG:seg	:	:

Description

Proteasome subunit alpha type

Coordinates

chr7:+:175113240..175117402

Molecular Weight (calculated)

29956.9 Da

IEP (calculated)

5.926

GRAVY (calculated)

-0.177

Length

275 amino acids

Sequence
(BLAST)

001: MLLLLLPAGE VKHEVASGGG EDKNLTMSSI GTGYDLSVTT FSPDGRVFQV EYATKAVDNS GTIVGIKCKD GIVLGVEKLV TSKMMLEGSN RRIHSVHRHS
101: GLAVAGLAAD GRQIVSRTKS EAASYEKVYG EPISVKELAD RVASYVHLCT LYWWLRPFGC GVILGGYDRD GPQLYMIEPS GVSYKYFGAA LGKGRQAAKT
201: EIEKLKLSEL TCREGIVEVA KIIYGVHDEA KDKAFELELS WICDESNRQH QKVPNELLEQ AKAAAQAALE EMDAD

Best Arabidopsis Sequence Match ( AT2G27020.1 )
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQIEYAAKA VDNSGTVVGI KCKDGIVMGV EKLIASKMML PGSNRRIHSV HRHAGMAVAG LAADGRQIVA RAKSEARSYE
101: SVYGDAVPVK ELSERVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGISYRY FGAAIGKGKQ AAKTEIEKLN LSEMTCKEGV IEVAKIIYKL
201: HDEAKDKAFE LEMSWICEES KREHQKVPDD LLEEAKTAAK TALEEMDAD

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.