Factsheet for Zm00001d051211_P008

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05472	Sorghum	cytosol	49.79	99.57
Zm00001d017338_P006	Maize	cytosol	50.21	98.33
Zm00001d017336_P007	Maize	cytosol	50.21	98.33
TraesCS3D01G285400.1	Wheat	cytosol	48.94	97.87
TraesCS2D01G198400.1	Wheat	cytosol	48.72	97.45
TraesCS2B01G217800.1	Wheat	cytosol	48.72	97.45
TraesCS2A01G189400.1	Wheat	cytosol	48.72	97.45
TraesCS3A01G285600.1	Wheat	cytosol	48.72	97.45
HORVU3Hr1G068660.1	Barley	cytosol	48.72	97.45
Os02t0634900-01	Rice	cytosol, plasma membrane	48.51	97.02
TraesCS3B01G319500.1	Wheat	cytosol	48.72	94.63
GSMUA_Achr5P19360_001	Banana	cytosol	45.74	91.49
VIT_01s0011g01960.t01	Wine grape	cytosol	45.53	91.06
KRH43728	Soybean	cytosol, endoplasmic reticulum, nucleus	45.32	90.64
Bra008402.1-P	Field mustard	cytosol	45.32	90.64
Solyc10g008010.2.1	Tomato	extracellular, plastid	45.32	90.64
Bra035099.1-P	Field mustard	cytosol	45.32	90.64
PGSC0003DMT400027339	Potato	cytosol	45.32	90.64
KRH75739	Soybean	cytosol, endoplasmic reticulum, nucleus	45.32	90.64
CDY22253	Canola	cytosol	45.32	90.64
AT1G16470.2	Thale cress	cytosol	45.32	90.64
CDX68003	Canola	cytosol, extracellular	45.32	90.64
CDX79306	Canola	cytosol	45.32	90.64
GSMUA_Achr8P13980_001	Banana	cytosol	45.32	90.64
CDY26894	Canola	cytosol	45.32	90.64
KRH65961	Soybean	cytosol	45.11	90.21
KRH13728	Soybean	cytosol	45.11	90.21
AT1G79210.1	Thale cress	cytosol	44.89	89.79
PGSC0003DMT400052657	Potato	cytosol	44.68	89.36
Solyc07g055080.2.1	Tomato	cytosol, endoplasmic reticulum	44.47	88.94
Bra003618.1-P	Field mustard	cytosol	45.32	86.94
HORVU2Hr1G036390.6	Barley	plastid	46.81	81.48
Zm00001d017340_P002	Maize	cytosol	30.85	76.32
CDX88517	Canola	cytosol	45.32	69.38
CDX87400	Canola	extracellular	45.32	66.56
Zm00001d053217_P001	Maize	cytosol, extracellular	18.72	35.34
Zm00001d006235_P001	Maize	cytosol, extracellular	18.72	35.34
Zm00001d022629_P001	Maize	cytosol	18.51	34.94
Zm00001d027688_P002	Maize	peroxisome	17.02	33.76
Zm00001d036319_P001	Maize	cytosol	17.87	33.6
Zm00001d045194_P001	Maize	extracellular	17.87	33.6
Zm00001d048271_P001	Maize	cytosol, extracellular	16.81	32.11
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	16.6	31.71
Zm00001d012546_P002	Maize	cytosol	16.38	30.08
Zm00001d043137_P004	Maize	cytosol	15.74	28.79
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	16.6	28.47
Zm00001d048403_P001	Maize	extracellular	17.02	27.3
Zm00001d022316_P001	Maize	cytosol	15.96	27.27
Zm00001d034938_P001	Maize	cytosol	4.47	21.0
Zm00001d007038_P001	Maize	cytosol	16.17	19.59
Zm00001d022131_P001	Maize	mitochondrion	12.98	19.18

Protein Annotations

EntrezGene:103653823	MapMan:19.2.6.1.1.2	Gene3D:3.60.20.10	UniProt:A0A1D6Q5L0	ProteinID:AQK53820.1	ProteinID:AQK53828.1
ProteinID:AQK53839.1	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839
GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475
PANTHER:PTHR11599	PANTHER:PTHR11599:SF16	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha2
SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI000842A194	EnsemblPlantsGene:Zm00001d051211	EnsemblPlants:Zm00001d051211_P008	EnsemblPlants:Zm00001d051211_T008

Description

Proteasome subunit alpha type

Coordinates

chr4:+:148716633..148733393

Molecular Weight (calculated)

51736.9 Da

IEP (calculated)

6.538

GRAVY (calculated)

-0.165

Length

470 amino acids

Sequence
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA ANGVVIATEK KLPSILVDET SVQKIQALTP NIGVVYSGMG PDFRVLVRKS RKQAQQYYRL
101: YKEHIPVTQL VRETAAVMQE FTQSGGVRPF GVSLLIAGYD DNGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGYE
201: GQISSNNIEI GIIRADREFK GNVSVYYVFV VGNLRLFDIT NSLLLQMVCP SGKLVQIEHA LTAVGSGQTS LGIKAANGVV IATEKKLPSI LVDETSVQKI
301: QALTPNIGVV YSGMGPDFRV LVRKSRKQAQ QYYRLYKEHI PVTQLVRETA AVMQEFTQSG GVRPFGVSLL IAGYDDNGPQ LYQVDPSGSY FSWKASAMGK
401: NVSNAKTFLE KRYTEDMELD DAIHTAILTL KEGYEGQISS NNIEIGIIRA DREFKVLSPS EIKDFLEEVE

Best Arabidopsis Sequence Match ( AT1G16470.1 )
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA SNGVVIATEK KLPSILVDEA SVQKIQHLTP NIGVVYSGMG PDFRVLVRKS RKQAEQYLRL
101: YKEPIPVTQL VRETATVMQE FTQSGGVRPF GVSLLVAGYD DKGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGFE
201: GEISSKNIEI GKIGADKVFR VLTPAEIDDY LAEVE

Arabidopsis Description

PAB1Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A178WA13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.