Factsheet for Os02t0634900-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G189400.1	Wheat	cytosol	99.57	99.57
TraesCS2B01G217800.1	Wheat	cytosol	99.57	99.57
TraesCS2D01G198400.1	Wheat	cytosol	99.57	99.57
TraesCS3A01G285600.1	Wheat	cytosol	99.57	99.57
HORVU3Hr1G068660.1	Barley	cytosol	99.57	99.57
Os03t0387100-01	Rice	cytosol, plasma membrane	99.15	99.15
TraesCS3D01G285400.1	Wheat	cytosol	99.15	99.15
EES05472	Sorghum	cytosol	97.45	97.45
TraesCS3B01G319500.1	Wheat	cytosol	99.57	96.69
Zm00001d017338_P006	Maize	cytosol	97.45	95.42
Zm00001d017336_P007	Maize	cytosol	97.45	95.42
GSMUA_Achr5P19360_001	Banana	cytosol	91.49	91.49
PGSC0003DMT400027339	Potato	cytosol	91.06	91.06
Solyc10g008010.2.1	Tomato	extracellular, plastid	91.06	91.06
VIT_01s0011g01960.t01	Wine grape	cytosol	91.06	91.06
CDY26894	Canola	cytosol	90.64	90.64
CDY22253	Canola	cytosol	90.64	90.64
KRH43728	Soybean	cytosol, endoplasmic reticulum, nucleus	90.64	90.64
CDX79306	Canola	cytosol	90.64	90.64
KRH75739	Soybean	cytosol, endoplasmic reticulum, nucleus	90.64	90.64
CDX68003	Canola	cytosol, extracellular	90.64	90.64
Bra035099.1-P	Field mustard	cytosol	90.64	90.64
Bra008402.1-P	Field mustard	cytosol	90.64	90.64
AT1G16470.2	Thale cress	cytosol	90.64	90.64
AT1G79210.1	Thale cress	cytosol	90.21	90.21
KRH65961	Soybean	cytosol	90.21	90.21
KRH13728	Soybean	cytosol	90.21	90.21
GSMUA_Achr8P13980_001	Banana	cytosol	89.79	89.79
PGSC0003DMT400052657	Potato	cytosol	88.94	88.94
Solyc07g055080.2.1	Tomato	cytosol, endoplasmic reticulum	88.51	88.51
Bra003618.1-P	Field mustard	cytosol	90.64	86.94
HORVU2Hr1G036390.6	Barley	plastid	95.74	83.33
Zm00001d017340_P002	Maize	cytosol	59.57	73.68
CDX88517	Canola	cytosol	90.64	69.38
CDX87400	Canola	extracellular	90.64	66.56
Zm00001d051211_P008	Maize	cytosol	97.02	48.51
Os08t0548900-01	Rice	plastid	38.72	36.55
Os09t0538200-01	Rice	cytosol, plastid	38.72	36.55
Os11t0615700-01	Rice	peroxisome	34.89	34.6
Os06t0176000-01	Rice	cytosol	35.74	33.6
Os06t0177100-01	Rice	plastid	35.74	33.6
Os06t0167600-01	Rice	cytosol	35.32	33.2
Os03t0180400-01	Rice	cytosol	34.04	32.52
Os01t0811100-01	Rice	cytosol	32.77	30.92
Os05t0490800-01	Rice	cytosol, plasma membrane	30.21	28.51
Os02t0133800-01	Rice	plastid	32.34	28.15
Os07t0614100-01	Rice	cytosol	28.94	26.88

Protein Annotations

MapMan:19.2.6.1.1.2	Gene3D:3.60.20.10	EntrezGene:4330075	EMBL:AK059769	EMBL:AK106210	ProteinID:BAD25097.1
ProteinID:BAF09430.1	ProteinID:BAS79934.1	ncoils:Coil	ProteinID:EEE57435.1	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	EnsemblPlantsGene:Os02g0634900
EnsemblPlants:Os02t0634900-01	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF16	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha2	UniProt:Q6H852
SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI00003B434E	RefSeq:XP_015625377.1	:	:

Description

OsTT1-like, TT1 paralog PAB2, 20S proteasome alpha2 subunitProteasome subunit alpha type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2). (Os02t0634900-01)

Coordinates

chr2:+:25454258..25458461

Molecular Weight (calculated)

25845.8 Da

IEP (calculated)

5.132

GRAVY (calculated)

-0.228

Length

235 amino acids

Sequence
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA ANGVVIATEK KLPSILVDET SVQKIQSLTP NIGVVYSGMG PDFRVLVRKS RKQAQQYYRL
101: YKETIPVTQL VRETAAVMQE FTQSGGVRPF GVSLLIAGYD DNGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGYE
201: GQISANNIEI GVIRSDREFK VLTPAEIKDF LEEVE

Best Arabidopsis Sequence Match ( AT1G16470.1 )
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA SNGVVIATEK KLPSILVDEA SVQKIQHLTP NIGVVYSGMG PDFRVLVRKS RKQAEQYLRL
101: YKEPIPVTQL VRETATVMQE FTQSGGVRPF GVSLLVAGYD DKGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGFE
201: GEISSKNIEI GKIGADKVFR VLTPAEIDDY LAEVE

Arabidopsis Description

PAB1Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A178WA13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.