Factsheet for TraesCS3D01G285400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G198400.1	Wheat	cytosol	99.57	99.57
TraesCS3A01G285600.1	Wheat	cytosol	99.57	99.57
HORVU3Hr1G068660.1	Barley	cytosol	99.57	99.57
Os02t0634900-01	Rice	cytosol, plasma membrane	99.15	99.15
EES05472	Sorghum	cytosol	97.45	97.45
TraesCS3B01G319500.1	Wheat	cytosol	99.57	96.69
Zm00001d017338_P006	Maize	cytosol	97.45	95.42
Zm00001d017336_P007	Maize	cytosol	97.45	95.42
GSMUA_Achr5P19360_001	Banana	cytosol	91.49	91.49
Solyc10g008010.2.1	Tomato	extracellular, plastid	90.64	90.64
PGSC0003DMT400027339	Potato	cytosol	90.64	90.64
KRH75739	Soybean	cytosol, endoplasmic reticulum, nucleus	90.64	90.64
KRH43728	Soybean	cytosol, endoplasmic reticulum, nucleus	90.64	90.64
CDY26894	Canola	cytosol	90.64	90.64
CDY22253	Canola	cytosol	90.64	90.64
VIT_01s0011g01960.t01	Wine grape	cytosol	90.64	90.64
CDX79306	Canola	cytosol	90.64	90.64
CDX68003	Canola	cytosol, extracellular	90.64	90.64
Bra035099.1-P	Field mustard	cytosol	90.64	90.64
Bra008402.1-P	Field mustard	cytosol	90.64	90.64
AT1G16470.2	Thale cress	cytosol	90.64	90.64
KRH13728	Soybean	cytosol	90.21	90.21
KRH65961	Soybean	cytosol	90.21	90.21
AT1G79210.1	Thale cress	cytosol	89.79	89.79
GSMUA_Achr8P13980_001	Banana	cytosol	89.79	89.79
PGSC0003DMT400052657	Potato	cytosol	88.94	88.94
Solyc07g055080.2.1	Tomato	cytosol, endoplasmic reticulum	88.51	88.51
Bra003618.1-P	Field mustard	cytosol	90.64	86.94
Zm00001d017340_P002	Maize	cytosol	60.43	74.74
CDX88517	Canola	cytosol	90.64	69.38
CDX87400	Canola	extracellular	90.64	66.56
Zm00001d051211_P008	Maize	cytosol	97.87	48.94
TraesCS7D01G272300.1	Wheat	cytosol	37.87	35.74
TraesCS7D01G129900.1	Wheat	cytosol	36.6	34.4
TraesCS4D01G157700.1	Wheat	peroxisome	33.19	32.91
TraesCS4D01G295500.1	Wheat	cytosol, golgi, plastid, unclear	34.04	32.52
TraesCS5D01G121300.1	Wheat	peroxisome	30.64	30.38
TraesCS5D01G295300.1	Wheat	cytosol	31.49	29.72
TraesCS1D01G307800.1	Wheat	cytosol	31.06	29.32
TraesCS6D01G084800.1	Wheat	golgi	32.34	26.39
TraesCS2D01G177600.1	Wheat	mitochondrion	26.38	23.13

Protein Annotations

MapMan:19.2.6.1.1.2	Gene3D:3.60.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005839	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773
GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584
ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF16	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N
InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha2	SMART:SM00948	SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS3D01G285400	EnsemblPlants:TraesCS3D01G285400.1
TIGR:cd03750	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:394765096..394769884

Molecular Weight (calculated)

25845.8 Da

IEP (calculated)

5.132

GRAVY (calculated)

-0.228

Length

235 amino acids

Sequence
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA ANGVVIATEK KLPSILVDET SVQKIQSLTP NIGVVYSGMG PDFRVLVRKS RKQAQQYYRL
101: YKETIPVTQL VRETAAVMQE FTQSGGVRPF GVSLLIAGYD DNGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGYE
201: GQISANNIEI GVIRADREFK VLTPSEIKDF LEEVE

Best Arabidopsis Sequence Match ( AT1G16470.1 )
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA SNGVVIATEK KLPSILVDEA SVQKIQHLTP NIGVVYSGMG PDFRVLVRKS RKQAEQYLRL
101: YKEPIPVTQL VRETATVMQE FTQSGGVRPF GVSLLVAGYD DKGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGFE
201: GEISSKNIEI GKIGADKVFR VLTPAEIDDY LAEVE

Arabidopsis Description

PAB1Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A178WA13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.