Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G130500.1 | Wheat | plastid | 100.0 | 100.0 |
| TraesCS7B01G030800.1 | Wheat | plastid | 99.6 | 99.6 |
| Zm00001d045194_P001 | Maize | extracellular | 96.0 | 96.0 |
| Os06t0177100-01 | Rice | plastid | 96.0 | 96.0 |
| Os06t0176000-01 | Rice | cytosol | 96.0 | 96.0 |
| Os06t0167600-01 | Rice | cytosol | 95.6 | 95.6 |
| OQU75904 | Sorghum | cytosol | 95.6 | 95.6 |
| Zm00001d036319_P001 | Maize | cytosol | 94.8 | 94.8 |
| HORVU7Hr1G027220.2 | Barley | cytosol | 92.0 | 86.79 |
| CDY37382 | Canola | cytosol | 68.0 | 84.58 |
| VIT_10s0042g00070.t01 | Wine grape | cytosol | 84.4 | 84.4 |
| PGSC0003DMT400049388 | Potato | cytosol | 84.0 | 84.34 |
| Bra023851.1-P | Field mustard | cytosol | 84.0 | 84.0 |
| Solyc02g081700.1.1 | Tomato | extracellular | 83.2 | 83.87 |
| GSMUA_Achr7P21280_001 | Banana | cytosol | 76.8 | 83.84 |
| CDY66240 | Canola | extracellular | 68.0 | 83.74 |
| KRH49455 | Soybean | endoplasmic reticulum, nucleus | 83.6 | 83.6 |
| Bra031328.1-P | Field mustard | cytosol, mitochondrion | 83.6 | 83.6 |
| KRH00322 | Soybean | cytosol | 83.2 | 83.2 |
| CDY69258 | Canola | cytosol, mitochondrion | 69.2 | 83.17 |
| CDY39501 | Canola | cytosol, mitochondrion | 66.8 | 83.08 |
| KRH76017 | Soybean | cytosol | 82.8 | 82.8 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 82.8 | 82.8 |
| KRH65617 | Soybean | nucleus | 82.8 | 82.8 |
| CDY19309 | Canola | extracellular | 66.4 | 82.59 |
| AT4G15165.1 | Thale cress | cytosol | 67.6 | 81.25 |
| GSMUA_Achr6P02000_001 | Banana | cytosol | 62.4 | 80.41 |
| GSMUA_Achr4P00300_001 | Banana | cytosol | 82.4 | 77.15 |
| Bra037085.1-P | Field mustard | cytosol | 84.4 | 68.51 |
| TraesCS4D01G157700.1 | Wheat | peroxisome | 38.0 | 40.08 |
| TraesCS2D01G198400.1 | Wheat | cytosol | 34.4 | 36.6 |
| TraesCS3D01G285400.1 | Wheat | cytosol | 34.4 | 36.6 |
| TraesCS7D01G272300.1 | Wheat | cytosol | 35.2 | 35.34 |
| TraesCS5D01G121300.1 | Wheat | peroxisome | 32.4 | 34.18 |
| TraesCS5D01G295300.1 | Wheat | cytosol | 30.8 | 30.92 |
| TraesCS1D01G307800.1 | Wheat | cytosol | 30.8 | 30.92 |
| TraesCS4D01G295500.1 | Wheat | cytosol, golgi, plastid, unclear | 30.0 | 30.49 |
| TraesCS6D01G084800.1 | Wheat | golgi | 29.6 | 25.69 |
| TraesCS2D01G177600.1 | Wheat | mitochondrion | 24.8 | 23.13 |
Protein Annotations
| MapMan:19.2.6.1.1.3 | Gene3D:3.60.20.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005839 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 |
| GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 |
| ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF13 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N |
| InterPro:Proteasome_sua/b | InterPro:Proteasome_subunit_alpha4 | SMART:SM00948 | SUPFAM:SSF56235 | EnsemblPlantsGene:TraesCS7D01G129900 | EnsemblPlants:TraesCS7D01G129900.1 |
| TIGR:cd03752 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:81920014..81920766
Molecular Weight (calculated)
26936.2 Da
IEP (calculated)
6.779
GRAVY (calculated)
-0.158
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSALGILAA DGVVLVGEKK VTSKLLQSSR SAEKMYKIDS HLACAVAGIM SDANILINTA RLHAQRYALS
101: YQEPIPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KNHGFQLYMS DPSGNYGGWK AAAVGANSQA AQSMLKQDYK DGMTREEAVA LALKVLSKTM
201: DSTSLTADKL ELAEVFVQPG TGEVQYQVCS PDAMGKLLAK AGLTQPAPEA
101: YQEPIPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KNHGFQLYMS DPSGNYGGWK AAAVGANSQA AQSMLKQDYK DGMTREEAVA LALKVLSKTM
201: DSTSLTADKL ELAEVFVQPG TGEVQYQVCS PDAMGKLLAK AGLTQPAPEA
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
Arabidopsis Description
PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.