Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39501 | Canola | cytosol, mitochondrion | 79.6 | 99.0 |
| Bra031328.1-P | Field mustard | cytosol, mitochondrion | 98.0 | 98.0 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 96.4 | 96.4 |
| KRH00322 | Soybean | cytosol | 91.6 | 91.6 |
| KRH76017 | Soybean | cytosol | 90.8 | 90.8 |
| KRH65617 | Soybean | nucleus | 90.8 | 90.8 |
| VIT_10s0042g00070.t01 | Wine grape | cytosol | 90.4 | 90.4 |
| KRH49455 | Soybean | endoplasmic reticulum, nucleus | 90.4 | 90.4 |
| Solyc02g081700.1.1 | Tomato | extracellular | 89.2 | 89.92 |
| GSMUA_Achr7P21280_001 | Banana | cytosol | 80.4 | 87.77 |
| PGSC0003DMT400049388 | Potato | cytosol | 86.8 | 87.15 |
| Zm00001d045194_P001 | Maize | extracellular | 84.8 | 84.8 |
| Zm00001d036319_P001 | Maize | cytosol | 84.0 | 84.0 |
| TraesCS7D01G129900.1 | Wheat | cytosol | 84.0 | 84.0 |
| TraesCS7B01G030800.1 | Wheat | plastid | 84.0 | 84.0 |
| TraesCS7A01G130500.1 | Wheat | plastid | 84.0 | 84.0 |
| OQU75904 | Sorghum | cytosol | 84.0 | 84.0 |
| GSMUA_Achr6P02000_001 | Banana | cytosol | 64.8 | 83.51 |
| Os06t0177100-01 | Rice | plastid | 82.4 | 82.4 |
| Os06t0167600-01 | Rice | cytosol | 82.4 | 82.4 |
| Os06t0176000-01 | Rice | cytosol | 82.4 | 82.4 |
| GSMUA_Achr4P00300_001 | Banana | cytosol | 87.6 | 82.02 |
| Bra037085.1-P | Field mustard | cytosol | 96.4 | 78.25 |
| HORVU7Hr1G027220.2 | Barley | cytosol | 79.2 | 74.72 |
| Bra030921.1-P | Field mustard | cytosol | 38.0 | 40.08 |
| Bra012861.1-P | Field mustard | cytosol | 35.2 | 35.2 |
| Bra036824.1-P | Field mustard | cytosol | 34.8 | 34.8 |
| Bra035099.1-P | Field mustard | cytosol | 32.0 | 34.04 |
| Bra008402.1-P | Field mustard | cytosol | 32.0 | 34.04 |
| Bra003618.1-P | Field mustard | cytosol | 32.0 | 32.65 |
| Bra013157.1-P | Field mustard | cytosol | 30.0 | 30.49 |
| Bra015170.1-P | Field mustard | cytosol | 30.0 | 30.49 |
| Bra014068.1-P | Field mustard | cytosol | 32.8 | 30.37 |
| Bra035332.1-P | Field mustard | cytosol | 32.4 | 29.89 |
| Bra027456.1-P | Field mustard | cytosol | 32.8 | 29.82 |
| Bra034316.1-P | Field mustard | cytosol | 29.2 | 29.32 |
Protein Annotations
| MapMan:19.2.6.1.1.3 | Gene3D:3.60.20.10 | EnsemblPlantsGene:Bra023851 | EnsemblPlants:Bra023851.1 | EnsemblPlants:Bra023851.1-P | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0019773 | GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | UniProt:M4E4Z7 |
| InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF13 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | InterPro:Proteasome_subunit_alpha4 | SMART:SM00948 |
| SUPFAM:SSF56235 | UniParc:UPI0002544367 | SEG:seg | : | : | : |
Description
AT3G22110 (E=4e-129) PAC1 | PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase
Coordinates
chrA01:+:20425548..20426300
Molecular Weight (calculated)
27340.5 Da
IEP (calculated)
6.680
GRAVY (calculated)
-0.263
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTTKLLQTST SSEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KNHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLSKTM
201: DSTSLTSEKL ELAEVFLTPS GSVKYHVHSP DSLTKLLVKH GVTQPAAESS
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KNHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLSKTM
201: DSTSLTSEKL ELAEVFLTPS GSVKYHVHSP DSLTKLLVKH GVTQPAAESS
001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS
Arabidopsis Description
PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.