Factsheet for Bra034316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04473	Canola	cytosol	100.0	100.0
CDY48190	Canola	cytosol	100.0	100.0
CDX71476	Canola	cytosol	99.6	99.6
CDX77059	Canola	cytosol	99.2	99.2
VIT_08s0040g00410.t01	Wine grape	cytosol	89.96	89.96
GSMUA_Achr8P23960_001	Banana	cytosol	89.96	89.96
PGSC0003DMT400072226	Potato	cytosol	89.96	89.96
GSMUA_Achr4P10040_001	Banana	cytosol	89.56	89.56
Solyc10g077030.1.1	Tomato	extracellular	89.56	89.56
Solyc10g081130.1.1	Tomato	extracellular, plastid	89.56	89.56
PGSC0003DMT400018521	Potato	cytosol	89.16	89.16
KRG94269	Soybean	cytosol	85.94	85.94
EES01630	Sorghum	cytosol	69.88	85.29
Os01t0811100-01	Rice	cytosol	84.74	84.74
EER97635	Sorghum	cytosol	84.74	84.74
Os05t0490800-01	Rice	cytosol, plasma membrane	83.53	83.53
Zm00001d043137_P004	Maize	cytosol	85.94	83.27
TraesCS5A01G287400.1	Wheat	cytosol, golgi, unclear	83.13	83.13
TraesCS5B01G286900.1	Wheat	cytosol	83.13	83.13
TraesCS5D01G295300.1	Wheat	cytosol	83.13	83.13
TraesCS1D01G307800.1	Wheat	cytosol	82.33	82.33
TraesCS1B01G319100.1	Wheat	cytosol	82.33	82.33
HORVU0Hr1G001180.1	Barley	cytosol	82.33	82.33
HORVU1Hr1G068490.1	Barley	cytosol	82.33	82.33
TraesCS1A01G308400.1	Wheat	cytosol	81.93	81.93
Zm00001d012546_P002	Maize	cytosol	83.94	81.64
KRH57704	Soybean	cytosol, endoplasmic reticulum	81.12	77.39
Zm00001d022316_P001	Maize	cytosol	83.94	76.0
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	99.2	70.37
HORVU5Hr1G076600.1	Barley	plastid	69.48	66.8
Zm00001d007038_P001	Maize	cytosol	84.34	54.12
Bra008402.1-P	Field mustard	cytosol	30.12	31.91
Bra035099.1-P	Field mustard	cytosol	30.12	31.91
Bra003618.1-P	Field mustard	cytosol	30.12	30.61
Bra031328.1-P	Field mustard	cytosol, mitochondrion	29.72	29.6
Bra023851.1-P	Field mustard	cytosol	29.32	29.2
Bra013157.1-P	Field mustard	cytosol	28.51	28.86
Bra014068.1-P	Field mustard	cytosol	30.92	28.52
Bra015170.1-P	Field mustard	cytosol	28.11	28.46
Bra030921.1-P	Field mustard	cytosol	26.1	27.43
Bra012861.1-P	Field mustard	cytosol	27.31	27.2
Bra036824.1-P	Field mustard	cytosol	27.31	27.2
Bra035332.1-P	Field mustard	cytosol	29.32	26.94
Bra027456.1-P	Field mustard	cytosol	29.32	26.55
Bra037085.1-P	Field mustard	cytosol	28.51	23.05

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	EnsemblPlantsGene:Bra034316	EnsemblPlants:Bra034316.1	EnsemblPlants:Bra034316.1-P	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	UniProt:M4EZS3
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF103	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha3	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948
SUPFAM:SSF56235	UniParc:UPI00025452C5	SEG:seg	:	:	:

Description

AT2G27020 (E=3e-124) PAG1 | PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase

Coordinates

chrA04:-:11858518..11860174

Molecular Weight (calculated)

27364.9 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.224

Length

249 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQIEYAAKA VDNSGTVVGI KCKDGIVMGV EKLIASKMML PGSNRRIHSV HRHAGMAVAG LAADGRQIVA RAKSEARSYE
101: SVYGDAVPVK ELSERVASYV HLCTLYWWLR PFGCGVILGG YDKDGPQLYM IEPSGISYRY FGAAIGKGKQ AAKTEIEKLK LSEMTCKEGV IEVAKIIYKL
201: HDEAKDKAFE LEMSWICEES KREHQKVPDD LLEEAKTAAK TALEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.2 )
(BLAST)

001: MWLIIQNYTK EENHLKIFTI PLKDYQRMGQ IIILIKPVNN RIDPPDKTTR IVLISNPESD GAPKIWLVSG LRTKKTPFFD LSLNHSTKKK SEKSQRKKKS
101: RKMSSIGTGY DLSVTTFSPD GRVFQIEYAA KAVDNSGTVV GIKCKDGIVM GVEKLIASKM MLPGSNRRIH SVHRHAGMAV AGLAADGRQI VARAKSEARS
201: YESVYGDAVP VKELSERVAS YVHLCTLYWW LRPFGCGVIL GGYDRDGPQL YMIEPSGISY RYFGAAIGKG KQAAKTEIEK LNLSEMTCKE GVIEVAKIIY
301: KLHDEAKDKA FELEMSWICE ESKREHQKVP DDLLEEAKTA AKTALEEMDA D

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.