Factsheet for Zm00001d007038_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97635	Sorghum	cytosol	62.63	97.59
Os01t0811100-01	Rice	cytosol	62.11	96.79
Zm00001d043137_P004	Maize	cytosol	63.66	96.11
Zm00001d012546_P002	Maize	cytosol	63.14	95.7
Zm00001d022316_P001	Maize	cytosol	65.72	92.73
PGSC0003DMT400018521	Potato	cytosol	57.73	89.96
Solyc10g077030.1.1	Tomato	extracellular	57.47	89.56
GSMUA_Achr8P23960_001	Banana	cytosol	57.22	89.16
PGSC0003DMT400072226	Potato	cytosol	57.22	89.16
Solyc10g081130.1.1	Tomato	extracellular, plastid	56.7	88.35
GSMUA_Achr4P10040_001	Banana	cytosol	56.7	88.35
VIT_08s0040g00410.t01	Wine grape	cytosol	56.19	87.55
KRG94269	Soybean	cytosol	55.93	87.15
Bra034316.1-P	Field mustard	cytosol	54.12	84.34
CDY48190	Canola	cytosol	54.12	84.34
CDY04473	Canola	cytosol	54.12	84.34
CDX71476	Canola	cytosol	53.87	83.94
CDX77059	Canola	cytosol	53.61	83.53
KRH57704	Soybean	cytosol, endoplasmic reticulum	52.32	77.78
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	57.73	63.82
Zm00001d036319_P001	Maize	cytosol	20.88	32.4
Zm00001d045194_P001	Maize	extracellular	20.62	32.0
Zm00001d017336_P007	Maize	cytosol	19.59	31.67
Zm00001d017338_P006	Maize	cytosol	19.59	31.67
Zm00001d053217_P001	Maize	cytosol, extracellular	19.59	30.52
Zm00001d022629_P001	Maize	cytosol	19.59	30.52
Zm00001d006235_P001	Maize	cytosol, extracellular	19.33	30.12
Zm00001d034938_P001	Maize	cytosol	7.73	30.0
Zm00001d027688_P002	Maize	peroxisome	18.3	29.96
Zm00001d048271_P001	Maize	cytosol, extracellular	18.3	28.86
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	20.1	28.47
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	18.04	28.46
Zm00001d048403_P001	Maize	extracellular	19.07	25.26
Zm00001d017340_P002	Maize	cytosol	10.57	21.58
Zm00001d022131_P001	Maize	mitochondrion	13.92	16.98
Zm00001d051211_P008	Maize	cytosol	19.59	16.17

Protein Annotations

EntrezGene:100383475	MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	UniProt:A0A1D6F2F6	ncoils:Coil	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
ProteinID:ONM25618.1	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF101	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235
UniParc:UPI000844C793	EnsemblPlantsGene:Zm00001d007038	EnsemblPlants:Zm00001d007038_P001	EnsemblPlants:Zm00001d007038_T001	SEG:seg	:

Description

Proteasome subunit alpha type

Coordinates

chr2:+:220640379..220648182

Molecular Weight (calculated)

42793.9 Da

IEP (calculated)

7.837

GRAVY (calculated)

-0.443

Length

388 amino acids

Sequence
(BLAST)

001: MKEDHEPWST RHTDDDRSGL GADGTQPIDH VGPPSINTSL FRSVILMRQM VRGRKRWASA TTPARRAPGL FCNSVGAAAV PAKYTYTTPC LWGEFGKQAL
101: EADRRREPET LTRPRRRDSG GGWPARRGEE NNLTMSSIGT GYDLSVTTFS PDGRVFQVEY ATKAVDNSGT VVGIKCKDGI VLGVEKLVTS KMMLEGSNRR
201: IHSVHRHSGL VMPLQAVAGL AADGRQIVSR TKSEAASYEK VYGEPIPVKE LADRVASYVH LCTLYWWLRP FGCGVILGGY DRDGPQLYMI EPSGVSYKYF
301: GAALGKGRQA AKTEIEKLKL SELTCREGIV EVAKIIYGVH DEAKDKAFEL ELSWICDESN HQHQKVPNEL LEHAKAAAQA ALEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.1 )
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQIEYAAKA VDNSGTVVGI KCKDGIVMGV EKLIASKMML PGSNRRIHSV HRHAGMAVAG LAADGRQIVA RAKSEARSYE
101: SVYGDAVPVK ELSERVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGISYRY FGAAIGKGKQ AAKTEIEKLN LSEMTCKEGV IEVAKIIYKL
201: HDEAKDKAFE LEMSWICEES KREHQKVPDD LLEEAKTAAK TALEEMDAD

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.