Factsheet for Zm00001d012546_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0811100-01	Rice	cytosol	94.14	96.79
EES01630	Sorghum	cytosol	76.56	96.08
Zm00001d043137_P004	Maize	cytosol	93.75	93.39
PGSC0003DMT400018521	Potato	cytosol	87.11	89.56
Solyc10g077030.1.1	Tomato	extracellular	86.72	89.16
PGSC0003DMT400072226	Potato	cytosol	86.33	88.75
Zm00001d022316_P001	Maize	cytosol	94.92	88.36
GSMUA_Achr8P23960_001	Banana	cytosol	85.94	88.35
Solyc10g081130.1.1	Tomato	extracellular, plastid	85.55	87.95
GSMUA_Achr4P10040_001	Banana	cytosol	85.55	87.95
VIT_08s0040g00410.t01	Wine grape	cytosol	84.77	87.15
KRG94269	Soybean	cytosol	84.38	86.75
CDY48190	Canola	cytosol	81.64	83.94
CDY04473	Canola	cytosol	81.64	83.94
Bra034316.1-P	Field mustard	cytosol	81.64	83.94
CDX71476	Canola	cytosol	81.25	83.53
CDX77059	Canola	cytosol	80.86	83.13
KRH57704	Soybean	cytosol, endoplasmic reticulum	78.91	77.39
Zm00001d007038_P001	Maize	cytosol	95.7	63.14
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	81.64	59.54
Zm00001d036319_P001	Maize	cytosol	32.03	32.8
Zm00001d045194_P001	Maize	extracellular	31.64	32.4
Zm00001d017336_P007	Maize	cytosol	30.08	32.08
Zm00001d017338_P006	Maize	cytosol	30.08	32.08
Zm00001d053217_P001	Maize	cytosol, extracellular	29.69	30.52
Zm00001d022629_P001	Maize	cytosol	29.69	30.52
Zm00001d006235_P001	Maize	cytosol, extracellular	29.3	30.12
Zm00001d034938_P001	Maize	cytosol	11.72	30.0
Zm00001d027688_P002	Maize	peroxisome	27.73	29.96
Zm00001d048271_P001	Maize	cytosol, extracellular	28.52	29.67
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	28.12	29.27
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	30.08	28.1
Zm00001d048403_P001	Maize	extracellular	27.34	23.89
Zm00001d017340_P002	Maize	cytosol	16.02	21.58
Zm00001d022131_P001	Maize	mitochondrion	21.48	17.3
Zm00001d051211_P008	Maize	cytosol	30.08	16.38

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	UniProt:A0A1D6G9P9	ProteinID:AQK99835.1	ncoils:Coil	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF101
InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI000843CB52
EnsemblPlantsGene:Zm00001d012546	EnsemblPlants:Zm00001d012546_P002	EnsemblPlants:Zm00001d012546_T002	SEG:seg	:	:

Description

Proteasome subunit alpha type-3

Coordinates

chr8:-:176436045..176440104

Molecular Weight (calculated)

28095.7 Da

IEP (calculated)

6.400

GRAVY (calculated)

-0.144

Length

256 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQVEYATKA VDNSGTVVGI KCKDGIVLGV EKLVTSKMML EGSNRRIHSV HRHSGLVILI HLQVVAGLAA DGRQIVSRAK
101: SEAASYEKVY GEPIPVKDLA DRVASYVHLC TLYWWLRPFG CGVILGGYDR DGPQLYMIEP SGVSYKYFGA ALGKGRQAAK TEIEKLKLSE LTCREGIVEV
201: AKIIYGVHDE SKDKAFELEL SWICDESNRQ HQKVPNELLE QAKAAAQAAL EEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.1 )
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQIEYAAKA VDNSGTVVGI KCKDGIVMGV EKLIASKMML PGSNRRIHSV HRHAGMAVAG LAADGRQIVA RAKSEARSYE
101: SVYGDAVPVK ELSERVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGISYRY FGAAIGKGKQ AAKTEIEKLN LSEMTCKEGV IEVAKIIYKL
201: HDEAKDKAFE LEMSWICEES KREHQKVPDD LLEEAKTAAK TALEEMDAD

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.