Factsheet for Zm00001d048403_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 2
peroxisome 2
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU93221	Sorghum	cytosol	80.55	99.58
Zm00001d027688_P002	Maize	peroxisome	80.2	99.16
Os11t0615700-01	Rice	peroxisome	79.18	97.89
TraesCS5B01G114000.1	Wheat	golgi, plastid, unclear	78.5	97.05
TraesCS4D01G157700.1	Wheat	peroxisome	77.82	96.2
TraesCS4B01G151700.1	Wheat	golgi, unclear	77.82	96.2
GSMUA_Achr10P...	Banana	peroxisome	77.47	95.78
GSMUA_Achr11P...	Banana	peroxisome	77.47	95.78
HORVU4Hr1G040770.1	Barley	cytosol	77.47	95.78
KRG90710	Soybean	peroxisome	77.13	95.36
KRH36037	Soybean	endoplasmic reticulum, nucleus	77.13	95.36
KRH69234	Soybean	endoplasmic reticulum	77.13	95.36
TraesCS4A01G167300.1	Wheat	peroxisome	76.79	94.94
KRH31817	Soybean	cytosol	76.45	94.51
Solyc02g070510.2.1	Tomato	nucleus	76.11	94.09
PGSC0003DMT400054523	Potato	cytosol	76.11	94.09
Bra030921.1-P	Field mustard	cytosol	76.11	94.09
AT1G53850.1	Thale cress	cytosol	76.11	94.09
Solyc08g016510.2.1	Tomato	extracellular	75.43	93.25
AT3G14290.1	Thale cress	cytosol	75.43	93.25
PGSC0003DMT400024982	Potato	cytosol, nucleus, peroxisome	75.43	93.25
TraesCS5D01G121300.1	Wheat	peroxisome	72.7	89.87
CDY08208	Canola	peroxisome	74.74	89.75
TraesCS5A01G109000.1	Wheat	peroxisome	58.36	88.14
CDY51800	Canola	peroxisome	74.74	87.6
CDY02493	Canola	mitochondrion	78.5	82.14
CDY25683	Canola	cytosol, plastid	78.5	81.27
VIT_09s0002g00350.t01	Wine grape	endoplasmic reticulum	77.47	77.47
GSMUA_Achr6P10850_001	Banana	mitochondrion	74.74	71.8
Zm00001d053217_P001	Maize	cytosol, extracellular	32.42	38.15
Zm00001d045194_P001	Maize	extracellular	32.42	38.0
Zm00001d036319_P001	Maize	cytosol	32.42	38.0
Zm00001d022629_P001	Maize	cytosol	31.74	37.35
Zm00001d006235_P001	Maize	cytosol, extracellular	31.4	36.95
Zm00001d017336_P007	Maize	cytosol	27.65	33.75
Zm00001d017338_P006	Maize	cytosol	27.65	33.75
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	29.01	31.02
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	25.6	30.49
Zm00001d048271_P001	Maize	cytosol, extracellular	25.6	30.49
Zm00001d012546_P002	Maize	cytosol	23.89	27.34
Zm00001d043137_P004	Maize	cytosol	23.55	26.85
Zm00001d034938_P001	Maize	cytosol	8.87	26.0
Zm00001d022316_P001	Maize	cytosol	24.23	25.82
Zm00001d017340_P002	Maize	cytosol	16.04	24.74
Zm00001d022131_P001	Maize	mitochondrion	20.82	19.18
Zm00001d007038_P001	Maize	cytosol	25.26	19.07
Zm00001d051211_P008	Maize	cytosol	27.3	17.02

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	UniProt:A0A1D6PJW1	ProteinID:AQL09576.1	ProteinID:AQL09578.1	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0043161	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948
SUPFAM:SSF56235	UniParc:UPI0008425EA4	EnsemblPlantsGene:Zm00001d048403	EnsemblPlants:Zm00001d048403_P001	EnsemblPlants:Zm00001d048403_T001	SEG:seg

Description

Proteasome subunit alpha type

Coordinates

chr9:-:155635584..155640617

Molecular Weight (calculated)

31495.2 Da

IEP (calculated)

4.740

GRAVY (calculated)

-0.267

Length

293 amino acids

Sequence
(BLAST)

001: MPSAASSLAS KVLAGGMRAG CGHGSDAGRE AQKSDQKPPR GGADAEFLLH PASTARMFLT RTEYDRGVNT FSPEGRLFQV EYAIEAIKLG STAIGLKTKD
101: GVVLAVEKRV TSPLLEPSSV EKIMEIDEHI GCAMSGLIAD ARTLVEHARV ETQNHRFSYG EPMTVESSTQ AICDLALRFG EGDEESMSRP FGVSLLIAGH
201: DENGPSLYYT DPSGTFWQCN AKAIGSGSEG ADSSLQEQYN KELALEEAET IALSILKQVM EEKVTPNNVD IAKVAPKYHL YTPAEVEAVI ARL

Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL

Arabidopsis Description

PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.