Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030921.1-P | Field mustard | cytosol | 83.75 | 100.0 |
| AT1G53850.1 | Thale cress | cytosol | 82.33 | 98.31 |
| KRH69234 | Soybean | endoplasmic reticulum | 80.92 | 96.62 |
| KRG90710 | Soybean | peroxisome | 80.21 | 95.78 |
| KRH31817 | Soybean | cytosol | 80.21 | 95.78 |
| KRH36037 | Soybean | endoplasmic reticulum, nucleus | 80.21 | 95.78 |
| PGSC0003DMT400024982 | Potato | cytosol, nucleus, peroxisome | 79.51 | 94.94 |
| Solyc08g016510.2.1 | Tomato | extracellular | 79.51 | 94.94 |
| CDY08208 | Canola | peroxisome | 81.63 | 94.67 |
| PGSC0003DMT400054523 | Potato | cytosol | 79.15 | 94.51 |
| GSMUA_Achr11P... | Banana | peroxisome | 79.15 | 94.51 |
| Solyc02g070510.2.1 | Tomato | nucleus | 79.15 | 94.51 |
| OQU93221 | Sorghum | cytosol | 78.8 | 94.09 |
| Os11t0615700-01 | Rice | peroxisome | 78.45 | 93.67 |
| TraesCS5B01G114000.1 | Wheat | golgi, plastid, unclear | 78.45 | 93.67 |
| Zm00001d027688_P002 | Maize | peroxisome | 78.45 | 93.67 |
| EES10115 | Sorghum | peroxisome | 78.45 | 93.67 |
| CDY51800 | Canola | peroxisome | 81.63 | 92.4 |
| TraesCS4A01G167300.1 | Wheat | peroxisome | 77.03 | 91.98 |
| TraesCS4B01G151700.1 | Wheat | golgi, unclear | 77.03 | 91.98 |
| TraesCS4D01G157700.1 | Wheat | peroxisome | 77.03 | 91.98 |
| HORVU4Hr1G040770.1 | Barley | cytosol | 77.03 | 91.98 |
| CDY02493 | Canola | mitochondrion | 88.69 | 89.64 |
| TraesCS5D01G121300.1 | Wheat | peroxisome | 72.44 | 86.5 |
| TraesCS5A01G109000.1 | Wheat | peroxisome | 58.66 | 85.57 |
| VIT_09s0002g00350.t01 | Wine grape | endoplasmic reticulum | 83.75 | 80.89 |
| Zm00001d048403_P001 | Maize | extracellular | 81.27 | 78.5 |
| CDY21248 | Canola | cytosol | 21.2 | 42.86 |
| CDY69258 | Canola | cytosol, mitochondrion | 26.86 | 36.54 |
| CDY66240 | Canola | extracellular | 26.15 | 36.45 |
| CDX73737 | Canola | cytosol, extracellular | 31.45 | 35.6 |
| CDX77988 | Canola | cytosol, extracellular | 31.45 | 35.6 |
| CDY29009 | Canola | cytosol | 31.45 | 35.6 |
| CDY39501 | Canola | cytosol, mitochondrion | 25.09 | 35.32 |
| CDY37382 | Canola | cytosol | 25.09 | 35.32 |
| CDX90655 | Canola | cytosol | 31.1 | 35.2 |
| CDY19309 | Canola | extracellular | 24.73 | 34.83 |
| CDX68003 | Canola | cytosol, extracellular | 27.92 | 33.62 |
| CDX79306 | Canola | cytosol | 27.92 | 33.62 |
| CDY26894 | Canola | cytosol | 27.92 | 33.62 |
| CDY22253 | Canola | cytosol | 27.92 | 33.62 |
| CDY02422 | Canola | cytosol | 31.1 | 32.47 |
| CDX71518 | Canola | cytosol | 30.74 | 32.1 |
| CDY52371 | Canola | cytosol | 31.1 | 32.0 |
| CDY47593 | Canola | cytosol | 30.74 | 31.87 |
| CDY17035 | Canola | cytosol | 30.74 | 31.87 |
| CDX95156 | Canola | cytosol | 31.1 | 31.77 |
| CDY33398 | Canola | cytosol, extracellular | 26.15 | 30.08 |
| CDY18045 | Canola | cytosol | 26.15 | 30.08 |
| CDY50408 | Canola | cytosol, extracellular | 25.44 | 29.51 |
| CDX93103 | Canola | cytosol | 26.15 | 28.14 |
| CDX88517 | Canola | cytosol | 29.68 | 27.36 |
| CDX81411 | Canola | mitochondrion, plastid | 26.15 | 26.15 |
| CDY04473 | Canola | cytosol | 22.97 | 26.1 |
| CDX77059 | Canola | cytosol | 22.97 | 26.1 |
| CDY48190 | Canola | cytosol | 22.97 | 26.1 |
| CDX71476 | Canola | cytosol | 22.97 | 26.1 |
| CDX87400 | Canola | extracellular | 28.98 | 25.62 |
Protein Annotations
| MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | GO:A0A078GM46 | UniProt:A0A078GM46 | EnsemblPlants:CDY25683 | ProteinID:CDY25683 |
| ProteinID:CDY25683.1 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 |
| GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0043161 | GO:GO:0051603 |
| EnsemblPlantsGene:GSBRNA2T00033024001 | InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 |
| ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_alpha_type_5 |
| InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | SMART:SM00948 | SUPFAM:SSF56235 | UniParc:UPI0004EDE38D | : |
Description
BnaC03g69920DProteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A078GM46]
Coordinates
chrLK032179:+:28691..32423
Molecular Weight (calculated)
31307.3 Da
IEP (calculated)
5.265
GRAVY (calculated)
-0.310
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MILRIIREIC CEPSEAKRRS RTHPVSSIRP PTSSQTLKGF YRSKKKMFLT RTEYDRGVNT FSPEGRLFQV EYAIEAIKLG STAIGVKTKE GVVLAVEKRI
101: TSPLLEPSSV EKIMEIDDHI GCAMSGLIAD ARTLVEHARV ETQNHRFSYG EPMTVESTTQ ALCDLALRFG EGDEESMSRP FGVSLLIAGH DENGPSLYYT
201: DPSGTFWQCN AKAIGSGSEG ADSSLQEQFN KDLSLEEAET IAVSILKQVM EEKVTPNNVD IAKVAPAYHI YTPQEVEAVI SRL
101: TSPLLEPSSV EKIMEIDDHI GCAMSGLIAD ARTLVEHARV ETQNHRFSYG EPMTVESTTQ ALCDLALRFG EGDEESMSRP FGVSLLIAGH DENGPSLYYT
201: DPSGTFWQCN AKAIGSGSEG ADSSLQEQFN KDLSLEEAET IAVSILKQVM EEKVTPNNVD IAKVAPAYHI YTPQEVEAVI SRL
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
Arabidopsis Description
PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.