Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
- mitochondrion 1
- nucleus 1
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69234 | Soybean | endoplasmic reticulum | 80.2 | 99.16 |
| KRH36037 | Soybean | endoplasmic reticulum, nucleus | 79.52 | 98.31 |
| KRH31817 | Soybean | cytosol | 79.52 | 98.31 |
| KRG90710 | Soybean | peroxisome | 79.52 | 98.31 |
| AT3G14290.1 | Thale cress | cytosol | 78.16 | 96.62 |
| Solyc08g016510.2.1 | Tomato | extracellular | 78.16 | 96.62 |
| Solyc02g070510.2.1 | Tomato | nucleus | 78.16 | 96.62 |
| PGSC0003DMT400054523 | Potato | cytosol | 78.16 | 96.62 |
| PGSC0003DMT400024982 | Potato | cytosol, nucleus, peroxisome | 78.16 | 96.62 |
| Bra030921.1-P | Field mustard | cytosol | 77.82 | 96.2 |
| Zm00001d027688_P002 | Maize | peroxisome | 77.82 | 96.2 |
| TraesCS5B01G114000.1 | Wheat | golgi, plastid, unclear | 77.82 | 96.2 |
| AT1G53850.1 | Thale cress | cytosol | 77.82 | 96.2 |
| Os11t0615700-01 | Rice | peroxisome | 77.82 | 96.2 |
| EES10115 | Sorghum | peroxisome | 77.82 | 96.2 |
| OQU93221 | Sorghum | cytosol | 77.47 | 95.78 |
| TraesCS4B01G151700.1 | Wheat | golgi, unclear | 76.11 | 94.09 |
| TraesCS4D01G157700.1 | Wheat | peroxisome | 76.11 | 94.09 |
| HORVU4Hr1G040770.1 | Barley | cytosol | 76.11 | 94.09 |
| CDY08208 | Canola | peroxisome | 78.16 | 93.85 |
| TraesCS4A01G167300.1 | Wheat | peroxisome | 75.77 | 93.67 |
| CDY51800 | Canola | peroxisome | 77.82 | 91.2 |
| TraesCS5D01G121300.1 | Wheat | peroxisome | 72.01 | 89.03 |
| TraesCS5A01G109000.1 | Wheat | peroxisome | 58.36 | 88.14 |
| CDY02493 | Canola | mitochondrion | 80.89 | 84.64 |
| CDY25683 | Canola | cytosol, plastid | 80.89 | 83.75 |
| Zm00001d048403_P001 | Maize | extracellular | 77.47 | 77.47 |
| GSMUA_Achr6P10850_001 | Banana | mitochondrion | 76.11 | 73.11 |
| VIT_10s0042g00070.t01 | Wine grape | cytosol | 31.74 | 37.2 |
| VIT_03s0038g02300.t01 | Wine grape | cytosol | 30.72 | 36.14 |
| VIT_04s0023g03690.t01 | Wine grape | cytosol | 30.72 | 36.14 |
| VIT_01s0011g01960.t01 | Wine grape | cytosol | 26.96 | 33.62 |
| VIT_09s0002g00980.t01 | Wine grape | cytosol | 25.94 | 30.89 |
| VIT_18s0001g12760.t01 | Wine grape | cytosol | 29.69 | 30.63 |
| VIT_08s0040g00410.t01 | Wine grape | cytosol | 23.89 | 28.11 |
Protein Annotations
| EntrezGene:100263432 | wikigene:100263432 | MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | EMBL:AM476086 | ProteinID:CAN66160 |
| ProteinID:CAN66160.1 | ProteinID:CCB59241 | ProteinID:CCB59241.1 | UniProt:F6HXL1 | EMBL:FN596494 | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0043161 | GO:GO:0051603 |
| InterPro:IPR023332 | InterPro:IPR029055 | EntrezGene:LOC100263432 | wikigene:LOC100263432 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 |
| PFAM:PF10584 | ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type |
| InterPro:Proteasome_alpha_type_5 | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | SMART:SM00948 | SUPFAM:SSF56235 | MEROPS:T01.975 |
| TIGR:TC55092 | TMHMM:TMhelix | UniParc:UPI0002109F94 | ArrayExpress:VIT_09s0002g00350 | EnsemblPlantsGene:VIT_09s0002g00350 | EnsemblPlants:VIT_09s0002g00350.t01 |
| RefSeq:XP_002265563 | RefSeq:XP_002265563.1 | RefSeq:XP_003632854 | RefSeq:XP_003632854.1 | SEG:seg | : |
Description
Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:F6HXL1]
Coordinates
chr9:-:261096..267910
Molecular Weight (calculated)
32742.0 Da
IEP (calculated)
4.513
GRAVY (calculated)
0.062
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFSCYFGFI LFRSLGFFFF FLGGGGVVVE FDFWFVILIF RVVFSSIFFF RSEQYKMFLT RTEYDRGVNT FSPEGRLFQV EYAIEAIKLG STAIGLKTKE
101: GVVLAVEKRI TSPLLEPSSV EKIMEIDEHI GCAMSGLIAD ARTLVEHARV ETQNHRFSYG EPMTVESTTQ ALCDLALRFG EGDEESMSRP FGVSLLIAGH
201: DENGPSLYYT DPSGTFWQCN AKAIGSGSEG ADSSLQEQFN QDLTLQEAET IALSILKQVM EEKVTPNNVD IAKVAPTYHL YTPAEVEAVI SRL
101: GVVLAVEKRI TSPLLEPSSV EKIMEIDEHI GCAMSGLIAD ARTLVEHARV ETQNHRFSYG EPMTVESTTQ ALCDLALRFG EGDEESMSRP FGVSLLIAGH
201: DENGPSLYYT DPSGTFWQCN AKAIGSGSEG ADSSLQEQFN QDLTLQEAET IALSILKQVM EEKVTPNNVD IAKVAPTYHL YTPAEVEAVI SRL
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDITLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDITLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL
Arabidopsis Description
PAE2Proteasome subunit alpha type-5-B [Source:UniProtKB/Swiss-Prot;Acc:Q42134]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.