Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- peroxisome 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G157700.1 | Wheat | peroxisome | 98.73 | 98.73 |
| TraesCS4B01G151700.1 | Wheat | golgi, unclear | 98.73 | 98.73 |
| TraesCS4A01G167300.1 | Wheat | peroxisome | 97.47 | 97.47 |
| Os11t0615700-01 | Rice | peroxisome | 97.05 | 97.05 |
| OQU93221 | Sorghum | cytosol | 96.2 | 96.2 |
| EES10115 | Sorghum | peroxisome | 96.2 | 96.2 |
| Zm00001d027688_P002 | Maize | peroxisome | 96.2 | 96.2 |
| GSMUA_Achr11P... | Banana | peroxisome | 95.78 | 95.78 |
| GSMUA_Achr10P... | Banana | peroxisome | 94.94 | 94.94 |
| KRG90710 | Soybean | peroxisome | 94.09 | 94.09 |
| KRH36037 | Soybean | endoplasmic reticulum, nucleus | 94.09 | 94.09 |
| KRH69234 | Soybean | endoplasmic reticulum | 94.09 | 94.09 |
| PGSC0003DMT400054523 | Potato | cytosol | 94.09 | 94.09 |
| Solyc02g070510.2.1 | Tomato | nucleus | 94.09 | 94.09 |
| Solyc08g016510.2.1 | Tomato | extracellular | 93.25 | 93.25 |
| PGSC0003DMT400024982 | Potato | cytosol, nucleus, peroxisome | 93.25 | 93.25 |
| KRH31817 | Soybean | cytosol | 93.25 | 93.25 |
| AT1G53850.1 | Thale cress | cytosol | 92.41 | 92.41 |
| Bra030921.1-P | Field mustard | cytosol | 91.98 | 91.98 |
| AT3G14290.1 | Thale cress | cytosol | 91.98 | 91.98 |
| CDY08208 | Canola | peroxisome | 90.72 | 88.11 |
| CDY51800 | Canola | peroxisome | 90.72 | 86.0 |
| HORVU5Hr1G038710.1 | Barley | cytosol | 66.24 | 78.89 |
| CDY02493 | Canola | mitochondrion | 91.98 | 77.86 |
| Zm00001d048403_P001 | Maize | extracellular | 95.78 | 77.47 |
| CDY25683 | Canola | cytosol, plastid | 91.98 | 77.03 |
| VIT_09s0002g00350.t01 | Wine grape | endoplasmic reticulum | 94.09 | 76.11 |
| GSMUA_Achr6P10850_001 | Banana | mitochondrion | 90.72 | 70.49 |
| HORVU6Hr1G051730.1 | Barley | cytosol | 20.68 | 39.52 |
| HORVU5Hr1G083350.1 | Barley | cytosol | 37.97 | 36.14 |
| HORVU7Hr1G027220.2 | Barley | cytosol | 38.82 | 34.72 |
| HORVU3Hr1G068660.1 | Barley | cytosol | 33.33 | 33.62 |
| HORVU7Hr1G057390.2 | Barley | cytosol, nucleus, plastid | 38.4 | 32.04 |
| HORVU6Hr1G017500.1 | Barley | cytosol | 35.87 | 29.51 |
| HORVU2Hr1G036390.6 | Barley | plastid | 31.65 | 27.78 |
| HORVU1Hr1G068490.1 | Barley | cytosol | 29.11 | 27.71 |
| HORVU0Hr1G001180.1 | Barley | cytosol | 29.11 | 27.71 |
| HORVU4Hr1G076770.2 | Barley | cytosol | 31.22 | 26.24 |
| HORVU3Hr1G068630.1 | Barley | mitochondrion | 15.61 | 24.34 |
| HORVU5Hr1G076600.1 | Barley | plastid | 23.63 | 21.62 |
| HORVU4Hr1G042970.6 | Barley | cytosol, golgi, nucleus | 26.16 | 18.96 |
Protein Annotations
| MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | EMBL:AK364690 | EMBL:AK367709 | UniProt:F2DLC2 | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0019773 | GO:GO:0043161 | GO:GO:0051603 | EnsemblPlantsGene:HORVU4Hr1G040770 | EnsemblPlants:HORVU4Hr1G040770.1 |
| InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 |
| PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_alpha_type_5 | InterPro:Proteasome_asu_N |
| InterPro:Proteasome_sua/b | SMART:SM00948 | SUPFAM:SSF56235 | UniParc:UPI0001B83790 | : | : |
Description
Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:F2DLC2]
Coordinates
chrchr4H:-:315062728..315067562
Molecular Weight (calculated)
25933.6 Da
IEP (calculated)
4.341
GRAVY (calculated)
-0.159
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGL MTKYGVVLAV EKRVTSPLLE PSSVEKIMEI DEHVGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQAICDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQYNKELTIA EAETIALSIL
201: KQVMEEKVTP NNVDIANVSP SYHLYTPAEV EAVIARL
101: FSYGEPMTVE STTQAICDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQYNKELTIA EAETIALSIL
201: KQVMEEKVTP NNVDIANVSP SYHLYTPAEV EAVIARL
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
Arabidopsis Description
PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.