Factsheet for GSMUA_Achr10P18720_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	peroxisome	99.16	99.16
Zm00001d027688_P002	Maize	peroxisome	96.62	96.62
Os11t0615700-01	Rice	peroxisome	96.62	96.62
EES10115	Sorghum	peroxisome	96.62	96.62
OQU93221	Sorghum	cytosol	96.2	96.2
TraesCS5B01G114000.1	Wheat	golgi, plastid, unclear	95.78	95.78
TraesCS4A01G167300.1	Wheat	peroxisome	95.36	95.36
TraesCS4D01G157700.1	Wheat	peroxisome	94.94	94.94
TraesCS4B01G151700.1	Wheat	golgi, unclear	94.94	94.94
HORVU4Hr1G040770.1	Barley	cytosol	94.94	94.94
TraesCS5D01G121300.1	Wheat	peroxisome	88.61	88.61
TraesCS5A01G109000.1	Wheat	peroxisome	71.73	87.63
Zm00001d048403_P001	Maize	extracellular	95.78	77.47
GSMUA_Achr6P10850_001	Banana	mitochondrion	94.09	73.11
GSMUA_Achr7P21280_001	Banana	cytosol	38.4	39.74
GSMUA_Achr11P...	Banana	cytosol	39.24	37.35
GSMUA_Achr2P03470_001	Banana	cytosol	38.82	36.95
GSMUA_Achr4P00300_001	Banana	cytosol	39.66	35.21
GSMUA_Achr6P02000_001	Banana	cytosol	28.69	35.05
GSMUA_Achr8P13980_001	Banana	cytosol	33.33	33.62
GSMUA_Achr5P19360_001	Banana	cytosol	33.33	33.62
GSMUA_Achr10P...	Banana	cytosol	36.29	32.45
GSMUA_Achr6P11610_001	Banana	cytosol	30.8	29.67
GSMUA_Achr10P...	Banana	cytosol	30.38	29.27
GSMUA_Achr8P23960_001	Banana	cytosol	27.85	26.51
GSMUA_Achr4P10040_001	Banana	cytosol	27.85	26.51
GSMUA_Achr3P02110_001	Banana	cytosol	12.24	21.17

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0043161
GO:GO:0051603	EnsemblPlantsGene:GSMUA_Achr10G18720_001	EnsemblPlants:GSMUA_Achr10P18720_001	EnsemblPlants:GSMUA_Achr10T18720_001	InterPro:IPR023332	InterPro:IPR029055
UniProt:M0RJE7	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475
PANTHER:PTHR11599	PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b
SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI0002950B09	:	:	:

Description

Proteasome subunit alpha type-5 [Source:GMGC_GENE;Acc:GSMUA_Achr10G18720_001]

Coordinates

chr10:+:25315661..25320930

Molecular Weight (calculated)

26032.8 Da

IEP (calculated)

4.468

GRAVY (calculated)

-0.222

Length

237 amino acids

Sequence
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGL RTKEGVVLAV EKRVTSPLLE PSSVEKIMEI DEHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGDEES MSRPFGVSLL IAGHDEHGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQYNKDLTLQ EAETIALSIL
201: KQVMEEKVTP NNVDIAKVAP TYHLYTPSEV EAVIARL

Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL

Arabidopsis Description

PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.