Factsheet for TraesCS5D01G121300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G114000.1	Wheat	golgi, plastid, unclear	92.83	92.83
TraesCS5A01G109000.1	Wheat	peroxisome	75.11	91.75
Zm00001d027688_P002	Maize	peroxisome	90.72	90.72
EES10115	Sorghum	peroxisome	90.72	90.72
OQU93221	Sorghum	cytosol	90.3	90.3
TraesCS4D01G157700.1	Wheat	peroxisome	89.45	89.45
KRH69234	Soybean	endoplasmic reticulum	89.03	89.03
GSMUA_Achr10P...	Banana	peroxisome	88.61	88.61
GSMUA_Achr11P...	Banana	peroxisome	88.61	88.61
AT1G53850.1	Thale cress	cytosol	88.19	88.19
KRH36037	Soybean	endoplasmic reticulum, nucleus	88.19	88.19
KRH31817	Soybean	cytosol	88.19	88.19
KRG90710	Soybean	peroxisome	88.19	88.19
AT3G14290.1	Thale cress	cytosol	87.76	87.76
Solyc02g070510.2.1	Tomato	nucleus	86.92	86.92
Solyc08g016510.2.1	Tomato	extracellular	86.92	86.92
PGSC0003DMT400054523	Potato	cytosol	86.92	86.92
PGSC0003DMT400024982	Potato	cytosol, nucleus, peroxisome	86.92	86.92
Bra030921.1-P	Field mustard	cytosol	86.5	86.5
CDY08208	Canola	peroxisome	85.23	82.79
CDY51800	Canola	peroxisome	85.23	80.8
CDY02493	Canola	mitochondrion	86.5	73.21
Zm00001d048403_P001	Maize	extracellular	89.87	72.7
CDY25683	Canola	cytosol, plastid	86.5	72.44
VIT_09s0002g00350.t01	Wine grape	endoplasmic reticulum	89.03	72.01
GSMUA_Achr6P10850_001	Banana	mitochondrion	84.39	65.57
TraesCS7D01G129900.1	Wheat	cytosol	34.18	32.4
TraesCS7D01G272300.1	Wheat	cytosol	33.33	31.73
TraesCS2D01G198400.1	Wheat	cytosol	30.8	31.06
TraesCS3D01G285400.1	Wheat	cytosol	30.38	30.64
TraesCS4D01G295500.1	Wheat	cytosol, golgi, plastid, unclear	26.58	25.61
TraesCS6D01G084800.1	Wheat	golgi	30.8	25.35
TraesCS5D01G295300.1	Wheat	cytosol	25.74	24.5
TraesCS1D01G307800.1	Wheat	cytosol	25.74	24.5
TraesCS2D01G177600.1	Wheat	mitochondrion	23.63	20.9

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004298	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0043161	GO:GO:0051603
InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS5D01G121300
EnsemblPlants:TraesCS5D01G121300.1	TIGR:cd03753	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:174003154..174007319

Molecular Weight (calculated)

24120.5 Da

IEP (calculated)

4.356

GRAVY (calculated)

-0.169

Length

237 amino acids

Sequence
(BLAST)

001: MFLTRTEYDR GVNTFSXXXX XXXXXXXXXX XXLGSTAIGL KTKDGVVLAV EKRVTSPLLE PSSVEKIMEI DEHVGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQAICDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKELTLQ EAETIALSIL
201: KQVMEEKVTP NNVDIAMVAP NYHLYTPAEV EAVIARL

Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL

Arabidopsis Description

PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.