Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 3
- vacuole 3
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08208 | Canola | peroxisome | 97.2 | 99.59 |
| AT1G53850.1 | Thale cress | cytosol | 92.0 | 97.05 |
| KRH69234 | Soybean | endoplasmic reticulum | 90.4 | 95.36 |
| KRH31817 | Soybean | cytosol | 89.6 | 94.51 |
| KRH36037 | Soybean | endoplasmic reticulum, nucleus | 89.6 | 94.51 |
| KRG90710 | Soybean | peroxisome | 89.6 | 94.51 |
| Solyc08g016510.2.1 | Tomato | extracellular | 88.8 | 93.67 |
| PGSC0003DMT400024982 | Potato | cytosol, nucleus, peroxisome | 88.8 | 93.67 |
| GSMUA_Achr11P... | Banana | peroxisome | 88.4 | 93.25 |
| Solyc02g070510.2.1 | Tomato | nucleus | 88.4 | 93.25 |
| PGSC0003DMT400054523 | Potato | cytosol | 88.4 | 93.25 |
| EES10115 | Sorghum | peroxisome | 87.6 | 92.41 |
| Zm00001d027688_P002 | Maize | peroxisome | 87.6 | 92.41 |
| TraesCS5B01G114000.1 | Wheat | golgi, plastid, unclear | 87.6 | 92.41 |
| OQU93221 | Sorghum | cytosol | 87.6 | 92.41 |
| Os11t0615700-01 | Rice | peroxisome | 87.6 | 92.41 |
| HORVU4Hr1G040770.1 | Barley | cytosol | 86.0 | 90.72 |
| TraesCS4A01G167300.1 | Wheat | peroxisome | 86.0 | 90.72 |
| TraesCS4B01G151700.1 | Wheat | golgi, unclear | 86.0 | 90.72 |
| TraesCS4D01G157700.1 | Wheat | peroxisome | 86.0 | 90.72 |
| TraesCS5A01G109000.1 | Wheat | peroxisome | 66.8 | 86.08 |
| TraesCS5D01G121300.1 | Wheat | peroxisome | 80.8 | 85.23 |
| CDY02493 | Canola | mitochondrion | 93.2 | 83.21 |
| CDY25683 | Canola | cytosol, plastid | 92.4 | 81.63 |
| VIT_09s0002g00350.t01 | Wine grape | endoplasmic reticulum | 91.2 | 77.82 |
| Zm00001d048403_P001 | Maize | extracellular | 87.6 | 74.74 |
| CDY21248 | Canola | cytosol | 23.2 | 41.43 |
| CDY29009 | Canola | cytosol | 35.6 | 35.6 |
| CDX77988 | Canola | cytosol, extracellular | 35.6 | 35.6 |
| CDX73737 | Canola | cytosol, extracellular | 35.6 | 35.6 |
| CDY69258 | Canola | cytosol, mitochondrion | 29.6 | 35.58 |
| CDY66240 | Canola | extracellular | 28.8 | 35.47 |
| CDX90655 | Canola | cytosol | 35.2 | 35.2 |
| CDY39501 | Canola | cytosol, mitochondrion | 27.6 | 34.33 |
| CDY37382 | Canola | cytosol | 27.6 | 34.33 |
| CDY19309 | Canola | extracellular | 27.2 | 33.83 |
| CDX68003 | Canola | cytosol, extracellular | 31.2 | 33.19 |
| CDY26894 | Canola | cytosol | 31.2 | 33.19 |
| CDY22253 | Canola | cytosol | 31.2 | 33.19 |
| CDX79306 | Canola | cytosol | 31.2 | 33.19 |
| CDY02422 | Canola | cytosol | 34.0 | 31.37 |
| CDX71518 | Canola | cytosol | 33.6 | 31.0 |
| CDY52371 | Canola | cytosol | 34.0 | 30.91 |
| CDY47593 | Canola | cytosol | 33.6 | 30.77 |
| CDY17035 | Canola | cytosol | 33.6 | 30.77 |
| CDX95156 | Canola | cytosol | 34.0 | 30.69 |
| CDY33398 | Canola | cytosol, extracellular | 29.6 | 30.08 |
| CDY18045 | Canola | cytosol | 29.6 | 30.08 |
| CDY50408 | Canola | cytosol, extracellular | 28.8 | 29.51 |
| CDX93103 | Canola | cytosol | 29.6 | 28.14 |
| CDX81411 | Canola | mitochondrion, plastid | 29.2 | 25.8 |
| CDX88517 | Canola | cytosol | 31.6 | 25.73 |
| CDX77059 | Canola | cytosol | 25.6 | 25.7 |
| CDY04473 | Canola | cytosol | 25.6 | 25.7 |
| CDX71476 | Canola | cytosol | 25.6 | 25.7 |
| CDY48190 | Canola | cytosol | 25.6 | 25.7 |
| CDX87400 | Canola | extracellular | 31.6 | 24.69 |
Protein Annotations
| MapMan:19.2.6.1.1.5 | Gene3D:3.60.20.10 | GO:A0A078IL73 | UniProt:A0A078IL73 | EnsemblPlants:CDY51800 | ProteinID:CDY51800 |
| ProteinID:CDY51800.1 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 |
| GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0043161 | GO:GO:0051603 |
| EnsemblPlantsGene:GSBRNA2T00004260001 | InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 |
| ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF14 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_alpha_type_5 |
| InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | SMART:SM00948 | SUPFAM:SSF56235 | SignalP:SignalP-noTM | UniParc:UPI0004EF3ADA |
Description
BnaC06g41960DProteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A078IL73]
Coordinates
chrLK033029:-:14697..16714
Molecular Weight (calculated)
27283.5 Da
IEP (calculated)
4.364
GRAVY (calculated)
-0.077
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQSLMLMVI CDVVVVGRTE YDRGVNTFSP EGRLFQVEYA IEAIKLGSTA IGVKTKEGVV LAVEKRITSP LLEPSSVEKI MEIDDHIGCA MSGLIADART
101: LVEHARVETQ NHRFSYGEPM TVESTTQALC DLALRFGEGD EESMSRPFGV SLLIAGHDEN GPSLYYTDPS GTFWQCNAKA IGSGSEGADS SLQEQFNKDL
201: SLSEAETIAV SILKQVMEEK VTPNNVDIAK VAPAYHLYTP QEVEAVISRL
101: LVEHARVETQ NHRFSYGEPM TVESTTQALC DLALRFGEGD EESMSRPFGV SLLIAGHDEN GPSLYYTDPS GTFWQCNAKA IGSGSEGADS SLQEQFNKDL
201: SLSEAETIAV SILKQVMEEK VTPNNVDIAK VAPAYHLYTP QEVEAVISRL
001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL
Arabidopsis Description
PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.