Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT5G66140.1 | Thale cress | cytosol | 62.54 | 70.8 |
CDY29009 | Canola | cytosol | 62.19 | 70.4 |
CDX77988 | Canola | cytosol, extracellular | 62.19 | 70.4 |
CDX73737 | Canola | cytosol, extracellular | 61.84 | 70.0 |
CDX90655 | Canola | cytosol | 61.48 | 69.6 |
VIT_04s0023g03690.t01 | Wine grape | cytosol | 60.42 | 68.67 |
GSMUA_Achr2P03470_001 | Banana | cytosol | 60.42 | 68.67 |
PGSC0003DMT400015849 | Potato | cytosol | 60.42 | 68.67 |
Solyc01g111450.2.1 | Tomato | plastid | 60.42 | 68.67 |
Zm00001d022629_P001 | Maize | cytosol | 60.07 | 68.27 |
Zm00001d006235_P001 | Maize | cytosol, extracellular | 60.07 | 68.27 |
KRH69759 | Soybean | endoplasmic reticulum, nucleus | 60.07 | 68.27 |
EER97100 | Sorghum | cytosol | 59.72 | 67.87 |
KRH08047 | Soybean | cytosol, endoplasmic reticulum, nucleus | 59.72 | 67.87 |
VIT_03s0038g02300.t01 | Wine grape | cytosol | 59.72 | 67.87 |
GSMUA_Achr11P... | Banana | cytosol | 59.36 | 67.47 |
Zm00001d053217_P001 | Maize | cytosol, extracellular | 59.01 | 67.07 |
TraesCS5A01G329300.1 | Wheat | cytosol | 58.66 | 66.67 |
TraesCS5B01G329400.1 | Wheat | cytosol | 58.66 | 66.67 |
Os09t0538200-01 | Rice | cytosol, plastid | 58.66 | 66.67 |
Os08t0548900-01 | Rice | plastid | 58.66 | 66.67 |
HORVU5Hr1G083350.1 | Barley | cytosol | 58.66 | 66.67 |
EES15231 | Sorghum | cytosol | 58.66 | 66.67 |
TraesCS7A01G272000.1 | Wheat | cytosol | 58.3 | 66.27 |
TraesCS7B01G170000.1 | Wheat | cytosol, golgi, plastid, unclear | 58.3 | 66.27 |
TraesCS7D01G272300.1 | Wheat | cytosol | 58.3 | 66.27 |
HORVU7Hr1G057390.2 | Barley | cytosol, nucleus, plastid | 59.36 | 59.15 |
CDX68003 | Canola | cytosol, extracellular | 26.5 | 31.91 |
CDX79306 | Canola | cytosol | 26.5 | 31.91 |
CDY22253 | Canola | cytosol | 26.5 | 31.91 |
CDY26894 | Canola | cytosol | 26.5 | 31.91 |
CDY69258 | Canola | cytosol, mitochondrion | 22.61 | 30.77 |
CDY18045 | Canola | cytosol | 26.5 | 30.49 |
CDY33398 | Canola | cytosol, extracellular | 26.5 | 30.49 |
CDY50408 | Canola | cytosol, extracellular | 26.15 | 30.33 |
CDY21248 | Canola | cytosol | 14.84 | 30.0 |
CDY08208 | Canola | peroxisome | 25.8 | 29.92 |
CDY37382 | Canola | cytosol | 21.2 | 29.85 |
CDY66240 | Canola | extracellular | 21.2 | 29.56 |
CDY51800 | Canola | peroxisome | 25.8 | 29.2 |
CDY39501 | Canola | cytosol, mitochondrion | 20.49 | 28.86 |
CDY19309 | Canola | extracellular | 20.49 | 28.86 |
CDX93103 | Canola | cytosol | 26.5 | 28.52 |
CDY02493 | Canola | mitochondrion | 26.15 | 26.43 |
CDY25683 | Canola | cytosol, plastid | 26.15 | 26.15 |
CDY17035 | Canola | cytosol | 25.09 | 26.01 |
CDY47593 | Canola | cytosol | 25.09 | 26.01 |
CDX71518 | Canola | cytosol | 24.73 | 25.83 |
CDY02422 | Canola | cytosol | 24.38 | 25.46 |
CDY52371 | Canola | cytosol | 24.73 | 25.45 |
CDX95156 | Canola | cytosol | 24.73 | 25.27 |
CDX88517 | Canola | cytosol | 26.5 | 24.43 |
CDX87400 | Canola | extracellular | 26.5 | 23.44 |
CDX71476 | Canola | cytosol | 19.08 | 21.69 |
CDX77059 | Canola | cytosol | 19.08 | 21.69 |
CDY04473 | Canola | cytosol | 19.08 | 21.69 |
CDY48190 | Canola | cytosol | 19.08 | 21.69 |
Protein Annotations
Gene3D:3.60.20.10 | MapMan:50.3.4 | GO:A0A078CW97 | EnsemblPlants:CDX81411 | ProteinID:CDX81411 | ProteinID:CDX81411.1 |
GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005839 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009056 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
GO:GO:0051603 | EnsemblPlantsGene:GSBRNA2T00134993001 | InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 |
PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF106 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 |
TMHMM:TMhelix | UniParc:UPI0004EEE399 | SEG:seg | : | : | : |
Description
BnaC09g08220D
Coordinates
chrLK031824:+:1578746..1580104
Molecular Weight (calculated)
31231.1 Da
IEP (calculated)
10.539
GRAVY (calculated)
-0.144
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFSVVPKSL CLAPQSIGRR RERWLDTIEQ LQSSPPDGHL FQVEYALEAV RKGNAAVGVR GTDTVVLAVE KKSTPKLQDS IACLDNHVAL ACAGLKADAR
101: VLINKARIDT RYIAGLQQKY TQSGGVRPFG LSTLIVGFDP YSRVPSLYQT DPSGTFSAWK ANSTGRNSNS IREFLEKNYK ETSGQETVKL AIRALLEVVE
201: SGGKNIEVAV MTREESRKKL KLMLLWPRSK QKRQLLKQPR KALKRTSVTQ HSAAISCFSI VISTLIIVFH LLVCLSLSLP PVP
101: VLINKARIDT RYIAGLQQKY TQSGGVRPFG LSTLIVGFDP YSRVPSLYQT DPSGTFSAWK ANSTGRNSNS IREFLEKNYK ETSGQETVKL AIRALLEVVE
201: SGGKNIEVAV MTREESRKKL KLMLLWPRSK QKRQLLKQPR KALKRTSVTQ HSAAISCFSI VISTLIIVFH LLVCLSLSLP PVP
001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD TVVLAVEKKS TPKLQDSRSA RKIVSLDNHI ALACAGLKAD ARVLINKARI ECQSHRLTLE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY SRLPSLYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SSGQETIKLA IRALLEVVES
201: GGKNIEVAVM TREETGLRQL EEAEIDAIVA KIEAEKAAAE AAKKGPPKET
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY SRLPSLYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SSGQETIKLA IRALLEVVES
201: GGKNIEVAVM TREETGLRQL EEAEIDAIVA KIEAEKAAAE AAKKGPPKET
Arabidopsis Description
PAD2Proteasome subunit alpha type-7-B [Source:UniProtKB/Swiss-Prot;Acc:O24616]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.