Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013157.1-P | Field mustard | cytosol | 92.4 | 98.78 |
| CDY50408 | Canola | cytosol, extracellular | 91.64 | 98.77 |
| CDY33398 | Canola | cytosol, extracellular | 92.02 | 98.37 |
| CDY18045 | Canola | cytosol | 92.02 | 98.37 |
| AT2G05840.1 | Thale cress | cytosol | 88.97 | 95.12 |
| KRH55422 | Soybean | cytosol, endoplasmic reticulum | 82.51 | 88.21 |
| KRH26034 | Soybean | nucleus | 82.51 | 88.21 |
| Solyc12g009140.1.1 | Tomato | extracellular | 82.13 | 87.8 |
| PGSC0003DMT400007520 | Potato | cytosol, extracellular | 82.13 | 87.8 |
| GSMUA_Achr10P... | Banana | cytosol | 81.75 | 87.4 |
| VIT_09s0002g00980.t01 | Wine grape | cytosol | 81.37 | 86.99 |
| GSMUA_Achr6P11610_001 | Banana | cytosol | 79.47 | 84.96 |
| Zm00001d027896_P001 | Maize | cytosol, extracellular, mitochondrion | 78.71 | 84.15 |
| Zm00001d048271_P001 | Maize | cytosol, extracellular | 78.33 | 83.74 |
| Os03t0180400-01 | Rice | cytosol | 78.33 | 83.74 |
| EER92751 | Sorghum | cytosol | 77.95 | 83.33 |
| TraesCS4D01G295500.1 | Wheat | cytosol, golgi, plastid, unclear | 77.19 | 82.52 |
| TraesCS4A01G008300.1 | Wheat | cytosol, golgi, plastid, unclear | 77.19 | 82.52 |
| HORVU4Hr1G076770.2 | Barley | cytosol | 77.57 | 72.34 |
| GSMUA_Achr3P02110_001 | Banana | cytosol | 31.94 | 61.31 |
| KXG36677 | Sorghum | plastid | 55.51 | 53.28 |
| TraesCS2D01G177600.1 | Wheat | mitochondrion | 50.57 | 49.63 |
| TraesCS2A01G170100.1 | Wheat | mitochondrion | 50.57 | 49.63 |
| Os07t0614100-01 | Rice | cytosol | 46.39 | 48.22 |
| TraesCS2B01G196400.1 | Wheat | mitochondrion | 49.43 | 44.67 |
| Zm00001d022131_P001 | Maize | mitochondrion | 48.67 | 40.25 |
| CDX79306 | Canola | cytosol | 31.18 | 34.89 |
| CDX68003 | Canola | cytosol, extracellular | 30.8 | 34.47 |
| CDY22253 | Canola | cytosol | 30.8 | 34.47 |
| CDY26894 | Canola | cytosol | 30.8 | 34.47 |
| CDX90655 | Canola | cytosol | 32.32 | 34.0 |
| CDX73737 | Canola | cytosol, extracellular | 32.32 | 34.0 |
| CDX77988 | Canola | cytosol, extracellular | 32.32 | 34.0 |
| CDY29009 | Canola | cytosol | 32.32 | 34.0 |
| CDY21248 | Canola | cytosol | 17.87 | 33.57 |
| CDY66240 | Canola | extracellular | 23.57 | 30.54 |
| CDY08208 | Canola | peroxisome | 28.14 | 30.33 |
| CDY37382 | Canola | cytosol | 22.81 | 29.85 |
| CDY51800 | Canola | peroxisome | 28.14 | 29.6 |
| CDY69258 | Canola | cytosol, mitochondrion | 22.81 | 28.85 |
| CDY47593 | Canola | cytosol | 29.66 | 28.57 |
| CDY02422 | Canola | cytosol | 29.28 | 28.41 |
| CDY52371 | Canola | cytosol | 29.66 | 28.36 |
| CDY17035 | Canola | cytosol | 29.28 | 28.21 |
| CDX95156 | Canola | cytosol | 29.66 | 28.16 |
| CDX77059 | Canola | cytosol | 26.62 | 28.11 |
| CDY48190 | Canola | cytosol | 26.62 | 28.11 |
| CDY04473 | Canola | cytosol | 26.62 | 28.11 |
| CDX71476 | Canola | cytosol | 26.62 | 28.11 |
| CDX71518 | Canola | cytosol | 28.9 | 28.04 |
| CDY19309 | Canola | extracellular | 21.29 | 27.86 |
| CDY39501 | Canola | cytosol, mitochondrion | 21.29 | 27.86 |
| CDX81411 | Canola | mitochondrion, plastid | 28.52 | 26.5 |
| CDY02493 | Canola | mitochondrion | 28.14 | 26.43 |
| CDX88517 | Canola | cytosol | 30.8 | 26.38 |
| CDY25683 | Canola | cytosol, plastid | 28.14 | 26.15 |
| CDX87400 | Canola | extracellular | 30.8 | 25.31 |
Protein Annotations
| MapMan:19.2.6.1.1.1 | Gene3D:3.60.20.10 | GO:A0A078E0M5 | EnsemblPlants:CDX93103 | ProteinID:CDX93103 | ProteinID:CDX93103.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005839 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0051603 | EnsemblPlantsGene:GSBRNA2T00155014001 |
| InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFAM:PF10584 | ScanProsite:PS00388 |
| PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF11 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b |
| InterPro:Proteasome_subunit_alpha6 | SMART:SM00948 | SUPFAM:SSF56235 | UniParc:UPI0004EE0F59 | : | : |
Description
BnaA03g38250D
Coordinates
chrLK031874:+:1201713..1203639
Molecular Weight (calculated)
29406.1 Da
IEP (calculated)
6.101
GRAVY (calculated)
-0.265
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGSGGGYD RHITIFSPEG RLFQVEYAFK AVKAAGITSI GVRGKDSVCV VTQKKVPDKL LDESSVTHLF PVTKYLGLLA TGMTADSRSL VTQARNEAAE
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVGKFC THFPTYLHIY TSTFAMVLGM DEERGPLLYK CDPAGHFYGH KATSAGMKEQ EAINFLEKKM
201: KENPAFTYDE TVQTAISALQ SVLQEDFKAT EIEVGVVRAD NPIFRCLETE EIEEHLTAIS ERD
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVGKFC THFPTYLHIY TSTFAMVLGM DEERGPLLYK CDPAGHFYGH KATSAGMKEQ EAINFLEKKM
201: KENPAFTYDE TVQTAISALQ SVLQEDFKAT EIEVGVVRAD NPIFRCLETE EIEEHLTAIS ERD
001: MSRGSGAGYD RHITIFSPEG RLFQVEYAFK AVKAAGITSI GVRGKDSVCV VTQKKVPDKL LDQSSVSHLF PVTKYLGLLA TGMTADSRSL VQQARNEAAE
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVVAMV LGIDEERGPL LYKCDPAGHF YGHKATSAGM KEQEAVNFLE KKMKENPAFT YDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RADDPLFRSL RTEEIDEHLT AISERD
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVVAMV LGIDEERGPL LYKCDPAGHF YGHKATSAGM KEQEAVNFLE KKMKENPAFT YDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RADDPLFRSL RTEEIDEHLT AISERD
Arabidopsis Description
PAA2Proteasome subunit alpha type-6-B [Source:UniProtKB/Swiss-Prot;Acc:O81147]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.