Factsheet for Bra013157.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015170.1-P	Field mustard	cytosol	98.78	98.78
AT2G05840.1	Thale cress	cytosol	95.53	95.53
CDX93103	Canola	cytosol	98.78	92.4
Solyc12g009140.1.1	Tomato	extracellular	88.21	88.21
PGSC0003DMT400007520	Potato	cytosol, extracellular	88.21	88.21
GSMUA_Achr10P...	Banana	cytosol	87.8	87.8
KRH55422	Soybean	cytosol, endoplasmic reticulum	87.8	87.8
KRH26034	Soybean	nucleus	87.8	87.8
VIT_09s0002g00980.t01	Wine grape	cytosol	87.4	87.4
GSMUA_Achr6P11610_001	Banana	cytosol	85.37	85.37
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	83.74	83.74
Os03t0180400-01	Rice	cytosol	83.33	83.33
Zm00001d048271_P001	Maize	cytosol, extracellular	83.33	83.33
EER92751	Sorghum	cytosol	82.93	82.93
TraesCS4A01G008300.1	Wheat	cytosol, golgi, plastid, unclear	82.11	82.11
TraesCS4D01G295500.1	Wheat	cytosol, golgi, plastid, unclear	82.11	82.11
HORVU4Hr1G076770.2	Barley	cytosol	82.52	71.99
GSMUA_Achr3P02110_001	Banana	cytosol	34.15	61.31
KXG36677	Sorghum	plastid	59.76	53.65
TraesCS2D01G177600.1	Wheat	mitochondrion	54.47	50.0
TraesCS2A01G170100.1	Wheat	mitochondrion	54.47	50.0
Os07t0614100-01	Rice	cytosol	49.19	47.83
TraesCS2B01G196400.1	Wheat	mitochondrion	53.25	45.02
Zm00001d022131_P001	Maize	mitochondrion	52.44	40.57
Bra008402.1-P	Field mustard	cytosol	33.33	34.89
Bra035099.1-P	Field mustard	cytosol	33.33	34.89
Bra036824.1-P	Field mustard	cytosol	34.55	34.0
Bra012861.1-P	Field mustard	cytosol	34.55	34.0
Bra003618.1-P	Field mustard	cytosol	33.33	33.47
Bra030921.1-P	Field mustard	cytosol	30.08	31.22
Bra023851.1-P	Field mustard	cytosol	30.49	30.0
Bra031328.1-P	Field mustard	cytosol, mitochondrion	30.49	30.0
Bra034316.1-P	Field mustard	cytosol	28.86	28.51
Bra035332.1-P	Field mustard	cytosol	31.3	28.41
Bra027456.1-P	Field mustard	cytosol	31.71	28.36
Bra014068.1-P	Field mustard	cytosol	30.89	28.15
Bra037085.1-P	Field mustard	cytosol	30.08	24.03

Protein Annotations

MapMan:19.2.6.1.1.1	Gene3D:3.60.20.10	EnsemblPlantsGene:Bra013157	EnsemblPlants:Bra013157.1	EnsemblPlants:Bra013157.1-P	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	UniProt:M4D9J7
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF11	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha6	SMART:SM00948
SUPFAM:SSF56235	UniParc:UPI0002540989	:	:	:	:

Description

AT2G05840 (E=1e-133) PAA2 | PAA2 (20S PROTEASOME SUBUNIT PAA2); endopeptidase/ peptidase/ threonine-type endopeptidase

Coordinates

chrA03:+:20142699..20144338

Molecular Weight (calculated)

27361.6 Da

IEP (calculated)

5.405

GRAVY (calculated)

-0.280

Length

246 amino acids

Sequence
(BLAST)

001: MSRGSGGGYD RHITIFSPEG RLFQVEYAFK AVKASGITSI GVRGKDSVCV VTQKKVPDKL LDESSVSHLF PVTKYLGLLA TGMTADSRSL VTQARNEAAE
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVVAMV LGMDEERGPL LYKCDPAGHF YGHKATSAGM KEQEAINFLE KKMKENPAFT YDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RADNPIFRCL ETEEIEEHLT AISERD

Best Arabidopsis Sequence Match ( AT2G05840.1 )
(BLAST)

001: MSRGSGAGYD RHITIFSPEG RLFQVEYAFK AVKAAGITSI GVRGKDSVCV VTQKKVPDKL LDQSSVSHLF PVTKYLGLLA TGMTADSRSL VQQARNEAAE
101: FRFQYGYEMP ADILAKWIAD KSQVYTQHAY MRPLGVVAMV LGIDEERGPL LYKCDPAGHF YGHKATSAGM KEQEAVNFLE KKMKENPAFT YDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RADDPLFRSL RTEEIDEHLT AISERD

Arabidopsis Description

PAA2Proteasome subunit alpha type-6-B [Source:UniProtKB/Swiss-Prot;Acc:O81147]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.