Factsheet for Bra031328.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66240	Canola	extracellular	80.8	99.51
Bra023851.1-P	Field mustard	cytosol	98.0	98.0
AT3G22110.1	Thale cress	cytosol, mitochondrion	95.2	95.2
KRH00322	Soybean	cytosol	90.8	90.8
KRH76017	Soybean	cytosol	90.0	90.0
KRH65617	Soybean	nucleus	90.0	90.0
VIT_10s0042g00070.t01	Wine grape	cytosol	89.6	89.6
KRH49455	Soybean	endoplasmic reticulum, nucleus	89.6	89.6
Solyc02g081700.1.1	Tomato	extracellular	88.4	89.11
GSMUA_Achr7P21280_001	Banana	cytosol	79.6	86.9
PGSC0003DMT400049388	Potato	cytosol	86.4	86.75
Zm00001d045194_P001	Maize	extracellular	84.4	84.4
Zm00001d036319_P001	Maize	cytosol	83.6	83.6
TraesCS7D01G129900.1	Wheat	cytosol	83.6	83.6
TraesCS7B01G030800.1	Wheat	plastid	83.6	83.6
TraesCS7A01G130500.1	Wheat	plastid	83.6	83.6
OQU75904	Sorghum	cytosol	83.6	83.6
GSMUA_Achr6P02000_001	Banana	cytosol	64.0	82.47
Os06t0177100-01	Rice	plastid	82.0	82.0
Os06t0167600-01	Rice	cytosol	82.0	82.0
Os06t0176000-01	Rice	cytosol	82.0	82.0
GSMUA_Achr4P00300_001	Banana	cytosol	86.8	81.27
Bra037085.1-P	Field mustard	cytosol	95.2	77.27
HORVU7Hr1G027220.2	Barley	cytosol	78.8	74.34
Bra030921.1-P	Field mustard	cytosol	38.0	40.08
Bra012861.1-P	Field mustard	cytosol	35.2	35.2
Bra036824.1-P	Field mustard	cytosol	34.8	34.8
Bra035099.1-P	Field mustard	cytosol	32.4	34.47
Bra008402.1-P	Field mustard	cytosol	32.4	34.47
Bra003618.1-P	Field mustard	cytosol	32.4	33.06
Bra014068.1-P	Field mustard	cytosol	33.6	31.11
Bra035332.1-P	Field mustard	cytosol	33.2	30.63
Bra027456.1-P	Field mustard	cytosol	33.6	30.55
Bra013157.1-P	Field mustard	cytosol	30.0	30.49
Bra015170.1-P	Field mustard	cytosol	30.0	30.49
Bra034316.1-P	Field mustard	cytosol	29.6	29.72

Protein Annotations

MapMan:19.2.6.1.1.3	Gene3D:3.60.20.10	EnsemblPlantsGene:Bra031328	EnsemblPlants:Bra031328.1	EnsemblPlants:Bra031328.1-P	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	UniProt:M4ERA5
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF13	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha4	SMART:SM00948
SUPFAM:SSF56235	UniParc:UPI00025476FF	SEG:seg	:	:	:

Description

AT3G22110 (E=2e-127) PAC1 | PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase

Coordinates

chrA05:-:15974753..15975505

Molecular Weight (calculated)

27334.5 Da

IEP (calculated)

6.681

GRAVY (calculated)

-0.278

Length

250 amino acids

Sequence
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST PSEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFT
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KNHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK EDATREEAVE LALKVLSKTM
201: DSTSLTSEKL ELAEVFLTPS GSVKYHVHSP DSLTKLLLKH GVTQPAAESS

Best Arabidopsis Sequence Match ( AT3G22110.1 )
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS

Arabidopsis Description

PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.