Factsheet for Bra037085.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69258	Canola	cytosol, mitochondrion	66.88	99.04
Bra023851.1-P	Field mustard	cytosol	78.25	96.4
Bra031328.1-P	Field mustard	cytosol, mitochondrion	77.27	95.2
AT4G15165.1	Thale cress	cytosol	62.01	91.83
KRH00322	Soybean	cytosol	73.38	90.4
VIT_10s0042g00070.t01	Wine grape	cytosol	73.05	90.0
KRH76017	Soybean	cytosol	72.73	89.6
KRH65617	Soybean	nucleus	72.73	89.6
KRH49455	Soybean	endoplasmic reticulum, nucleus	72.4	89.2
Solyc02g081700.1.1	Tomato	extracellular	71.1	88.31
PGSC0003DMT400049388	Potato	cytosol	70.45	87.15
GSMUA_Achr7P21280_001	Banana	cytosol	64.61	86.9
Zm00001d045194_P001	Maize	extracellular	69.81	86.0
Zm00001d036319_P001	Maize	cytosol	69.16	85.2
OQU75904	Sorghum	cytosol	69.16	85.2
TraesCS7D01G129900.1	Wheat	cytosol	68.51	84.4
TraesCS7B01G030800.1	Wheat	plastid	68.51	84.4
TraesCS7A01G130500.1	Wheat	plastid	68.51	84.4
Os06t0177100-01	Rice	plastid	67.86	83.6
Os06t0167600-01	Rice	cytosol	67.86	83.6
Os06t0176000-01	Rice	cytosol	67.86	83.6
GSMUA_Achr6P02000_001	Banana	cytosol	52.27	82.99
GSMUA_Achr4P00300_001	Banana	cytosol	70.45	81.27
HORVU7Hr1G027220.2	Barley	cytosol	64.94	75.47
Bra030921.1-P	Field mustard	cytosol	30.84	40.08
Bra012861.1-P	Field mustard	cytosol	29.22	36.0
Bra036824.1-P	Field mustard	cytosol	28.9	35.6
Bra035099.1-P	Field mustard	cytosol	26.62	34.89
Bra008402.1-P	Field mustard	cytosol	26.62	34.89
Bra003618.1-P	Field mustard	cytosol	26.62	33.47
Bra035332.1-P	Field mustard	cytosol	27.27	31.0
Bra027456.1-P	Field mustard	cytosol	27.6	30.91
Bra014068.1-P	Field mustard	cytosol	26.95	30.74
Bra013157.1-P	Field mustard	cytosol	24.03	30.08
Bra015170.1-P	Field mustard	cytosol	24.03	30.08
Bra034316.1-P	Field mustard	cytosol	23.05	28.51

Protein Annotations

MapMan:19.2.6.1.1.3	EnsemblPlantsGene:Bra037085	EnsemblPlants:Bra037085.1	EnsemblPlants:Bra037085.1-P	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	UniProt:M4F7M4	InterPro:Ntn_hydrolases_N
PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	ScanProsite:PS00854	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF13	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha4
SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI00025475DC	SEG:seg	:	:

Description

AT3G22110 (E=6e-079) PAC1 | PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase

Coordinates

chrA05:+:9910736..9912376

Molecular Weight (calculated)

34076.5 Da

IEP (calculated)

9.338

GRAVY (calculated)

-0.456

Length

308 amino acids

Sequence
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILAK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KNHGFQPKQP RDRDGDRKLG RERGRETSNF KFVNTGVPET SPSPLRTRYV RRHQLGVPVQ
201: PRFQLYMSDP SGNYGGWKAA AVGANNQAAQ SILKQDYKDD ASREDVVELA LKVLSKTMDS TSLTSEKLEL AEVFLTPSGS VQYHVHSPES LTKLLVKHGV
301: TQPAAEAS

Best Arabidopsis Sequence Match ( AT3G22110.1 )
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS

Arabidopsis Description

PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.