Factsheet for GSMUA_Achr7P21280_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P00300_001	Banana	cytosol	96.94	83.15
GSMUA_Achr6P02000_001	Banana	cytosol	69.87	82.47
KRH00322	Soybean	cytosol	89.08	81.6
KRH49455	Soybean	endoplasmic reticulum, nucleus	88.65	81.2
KRH65617	Soybean	nucleus	88.65	81.2
KRH76017	Soybean	cytosol	88.65	81.2
VIT_10s0042g00070.t01	Wine grape	cytosol	88.21	80.8
PGSC0003DMT400018852	Potato	cytosol	87.34	80.65
Bra023851.1-P	Field mustard	cytosol	87.77	80.4
Solyc02g081700.1.1	Tomato	extracellular	86.9	80.24
AT3G22110.1	Thale cress	cytosol, mitochondrion	86.9	79.6
Bra031328.1-P	Field mustard	cytosol, mitochondrion	86.9	79.6
Zm00001d045194_P001	Maize	extracellular	84.28	77.2
CDY37382	Canola	cytosol	67.69	77.11
TraesCS7D01G129900.1	Wheat	cytosol	83.84	76.8
TraesCS7B01G030800.1	Wheat	plastid	83.84	76.8
TraesCS7A01G130500.1	Wheat	plastid	83.84	76.8
OQU75904	Sorghum	cytosol	83.84	76.8
CDY69258	Canola	cytosol, mitochondrion	69.43	76.44
Zm00001d036319_P001	Maize	cytosol	83.41	76.4
CDY66240	Canola	extracellular	67.69	76.35
CDY39501	Canola	cytosol, mitochondrion	66.81	76.12
CDY19309	Canola	extracellular	66.38	75.62
Os06t0177100-01	Rice	plastid	82.53	75.6
Os06t0176000-01	Rice	cytosol	82.53	75.6
Os06t0167600-01	Rice	cytosol	82.53	75.6
AT4G15165.1	Thale cress	cytosol	68.56	75.48
HORVU7Hr1G027220.2	Barley	cytosol	79.48	68.68
Bra037085.1-P	Field mustard	cytosol	86.9	64.61
GSMUA_Achr11P...	Banana	peroxisome	40.17	38.82
GSMUA_Achr10P...	Banana	peroxisome	39.74	38.4
GSMUA_Achr8P13980_001	Banana	cytosol	35.81	34.89
GSMUA_Achr5P19360_001	Banana	cytosol	35.37	34.47
GSMUA_Achr11P...	Banana	cytosol	36.24	33.33
GSMUA_Achr2P03470_001	Banana	cytosol	35.81	32.93
GSMUA_Achr6P11610_001	Banana	cytosol	34.93	32.52
GSMUA_Achr10P...	Banana	cytosol	34.93	32.52
GSMUA_Achr8P23960_001	Banana	cytosol	31.88	29.32
GSMUA_Achr6P10850_001	Banana	mitochondrion	38.86	29.18
GSMUA_Achr10P...	Banana	cytosol	33.62	29.06
GSMUA_Achr4P10040_001	Banana	cytosol	31.0	28.51
GSMUA_Achr3P02110_001	Banana	cytosol	13.1	21.9

Protein Annotations

MapMan:19.2.6.1.1.3	Gene3D:3.60.20.10	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005839	GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603
EnsemblPlantsGene:GSMUA_Achr7G21280_001	EnsemblPlants:GSMUA_Achr7P21280_001	EnsemblPlants:GSMUA_Achr7T21280_001	InterPro:IPR023332	InterPro:IPR029055	UniProt:M0TJG5
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF13	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha4	SMART:SM00948
SUPFAM:SSF56235	UniParc:UPI0002949760	SEG:seg	:	:	:

Description

Proteasome subunit alpha type-4 [Source:GMGC_GENE;Acc:GSMUA_Achr7G21280_001]

Coordinates

chr7:+:24097727..24098867

Molecular Weight (calculated)

25387.2 Da

IEP (calculated)

5.382

GRAVY (calculated)

-0.283

Length

229 amino acids

Sequence
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGAAIGILAR DGVILVGEKK VTSKLLQTSR STEKMYKIDD HLACAVAGIM SDANILINTA RVQAQRYTFA
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KNYGFQLYMS DPSGNYSGWK AAAIGANNQA AQSMLKQDYK DDFTREEALE LAEIFVEPSG
201: DVKYQVCKPE LLEKLLVKHG VTQAATEST

Best Arabidopsis Sequence Match ( AT3G22110.1 )
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS

Arabidopsis Description

PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.