Factsheet for Zm00001d036319_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045194_P001	Maize	extracellular	98.0	98.0
OQU75904	Sorghum	cytosol	97.6	97.6
Os06t0167600-01	Rice	cytosol	95.2	95.2
TraesCS7D01G129900.1	Wheat	cytosol	94.8	94.8
TraesCS7B01G030800.1	Wheat	plastid	94.8	94.8
TraesCS7A01G130500.1	Wheat	plastid	94.8	94.8
Os06t0177100-01	Rice	plastid	94.8	94.8
Os06t0176000-01	Rice	cytosol	94.8	94.8
Solyc02g081700.1.1	Tomato	extracellular	84.8	85.48
CDY37382	Canola	cytosol	68.0	84.58
AT3G22110.1	Thale cress	cytosol, mitochondrion	84.4	84.4
KRH49455	Soybean	endoplasmic reticulum, nucleus	84.4	84.4
HORVU7Hr1G027220.2	Barley	cytosol	89.2	84.15
CDY69258	Canola	cytosol, mitochondrion	70.0	84.13
KRH00322	Soybean	cytosol	84.0	84.0
KRH65617	Soybean	nucleus	84.0	84.0
KRH76017	Soybean	cytosol	84.0	84.0
Bra023851.1-P	Field mustard	cytosol	84.0	84.0
PGSC0003DMT400049388	Potato	cytosol	83.6	83.94
CDY66240	Canola	extracellular	68.0	83.74
VIT_10s0042g00070.t01	Wine grape	cytosol	83.6	83.6
Bra031328.1-P	Field mustard	cytosol, mitochondrion	83.6	83.6
GSMUA_Achr7P21280_001	Banana	cytosol	76.4	83.41
CDY39501	Canola	cytosol, mitochondrion	66.8	83.08
CDY19309	Canola	extracellular	66.4	82.59
GSMUA_Achr6P02000_001	Banana	cytosol	63.6	81.96
AT4G15165.1	Thale cress	cytosol	67.6	81.25
GSMUA_Achr4P00300_001	Banana	cytosol	84.0	78.65
Bra037085.1-P	Field mustard	cytosol	85.2	69.16
Zm00001d027688_P002	Maize	peroxisome	38.0	40.08
Zm00001d053217_P001	Maize	cytosol, extracellular	35.2	35.34
Zm00001d017336_P007	Maize	cytosol	33.6	35.0
Zm00001d017338_P006	Maize	cytosol	33.6	35.0
Zm00001d022629_P001	Maize	cytosol	34.8	34.94
Zm00001d006235_P001	Maize	cytosol, extracellular	34.8	34.94
Zm00001d048271_P001	Maize	cytosol, extracellular	32.0	32.52
Zm00001d048403_P001	Maize	extracellular	38.0	32.42
Zm00001d012546_P002	Maize	cytosol	32.8	32.03
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	31.2	31.71
Zm00001d043137_P004	Maize	cytosol	31.2	30.35
Zm00001d022316_P001	Maize	cytosol	32.0	29.09
Zm00001d017340_P002	Maize	cytosol	21.2	27.89
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	30.4	27.74
Zm00001d034938_P001	Maize	cytosol	10.0	25.0
Zm00001d007038_P001	Maize	cytosol	32.4	20.88
Zm00001d022131_P001	Maize	mitochondrion	23.6	18.55
Zm00001d051211_P008	Maize	cytosol	33.6	17.87

Protein Annotations

EntrezGene:100191947	MapMan:19.2.6.1.1.3	Gene3D:3.60.20.10	ProteinID:AQK80623.1	UniProt:B4FAR8	EMBL:BT034206
EMBL:EU952827	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839
GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475
PANTHER:PTHR11599	PANTHER:PTHR11599:SF13	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha4
SMART:SM00948	SUPFAM:SSF56235	MEROPS:T01.973	UniParc:UPI00017B61EB	EnsemblPlantsGene:Zm00001d036319	EnsemblPlants:Zm00001d036319_P001
EnsemblPlants:Zm00001d036319_T001	SEG:seg	:	:	:	:

Description

proteasome component1Proteasome subunit alpha type

Coordinates

chr6:-:84001793..84002545

Molecular Weight (calculated)

27069.3 Da

IEP (calculated)

6.127

GRAVY (calculated)

-0.174

Length

250 amino acids

Sequence
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSALGILAA DGVVLVGEKK VTSKLLQTSR SAEKMYKIDS HLACAVAGIM SDANILINTA RLHAQRYALS
101: YQEPIPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANSQA AQSMLKQDYK DALTREEAVG LALKVLSKTM
201: DSTSLTAEKL ELAEVFLQPD TGEVQYQVCS PEALGKLLAN SGLTQPTPEA

Best Arabidopsis Sequence Match ( AT3G22110.1 )
(BLAST)

001: MSRRYDSRTT IFSPEGRLYQ VEYAMEAIGN AGSAIGILSK DGVVLIGEKK VTSKLLQTST SAEKMYKIDD HVACAVAGIM SDANILINTA RVQAQRYTFM
101: YQEPMPVEQL VQSLCDTKQG YTQFGGLRPF GVSFLFAGWD KHHGFQLYMS DPSGNYGGWK AAAVGANNQA AQSILKQDYK DDATREEAVE LALKVLTKTM
201: DSTSLTSEKL ELAEVYLTPS KTVKYHVHSP ESLTKLLVKH GVTQPAAETS

Arabidopsis Description

PAC1Proteasome subunit alpha type-4-A [Source:UniProtKB/Swiss-Prot;Acc:O81148]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.