Factsheet for Zm00001d043137_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01630	Sorghum	cytosol	77.04	97.06
Os01t0811100-01	Rice	cytosol	93.39	96.39
Zm00001d012546_P002	Maize	cytosol	93.39	93.75
PGSC0003DMT400018521	Potato	cytosol	85.6	88.35
Zm00001d022316_P001	Maize	cytosol	94.16	88.0
Solyc10g077030.1.1	Tomato	extracellular	85.21	87.95
PGSC0003DMT400072226	Potato	cytosol	85.21	87.95
GSMUA_Achr8P23960_001	Banana	cytosol	84.82	87.55
VIT_08s0040g00410.t01	Wine grape	cytosol	84.44	87.15
Solyc10g081130.1.1	Tomato	extracellular, plastid	84.44	87.15
GSMUA_Achr4P10040_001	Banana	cytosol	84.44	87.15
Bra034316.1-P	Field mustard	cytosol	83.27	85.94
CDY48190	Canola	cytosol	83.27	85.94
CDY04473	Canola	cytosol	83.27	85.94
CDX71476	Canola	cytosol	82.88	85.54
KRG94269	Soybean	cytosol	82.49	85.14
CDX77059	Canola	cytosol	82.49	85.14
KRH57704	Soybean	cytosol, endoplasmic reticulum	78.21	77.01
Zm00001d007038_P001	Maize	cytosol	96.11	63.66
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	83.27	60.97
Zm00001d045194_P001	Maize	extracellular	30.35	31.2
Zm00001d036319_P001	Maize	cytosol	30.35	31.2
Zm00001d017336_P007	Maize	cytosol	28.79	30.83
Zm00001d017338_P006	Maize	cytosol	28.79	30.83
Zm00001d022629_P001	Maize	cytosol	29.18	30.12
Zm00001d034938_P001	Maize	cytosol	11.67	30.0
Zm00001d053217_P001	Maize	cytosol, extracellular	28.79	29.72
Zm00001d006235_P001	Maize	cytosol, extracellular	28.79	29.72
Zm00001d027688_P002	Maize	peroxisome	27.24	29.54
Zm00001d048271_P001	Maize	cytosol, extracellular	27.24	28.46
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	26.85	28.05
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	29.18	27.37
Zm00001d048403_P001	Maize	extracellular	26.85	23.55
Zm00001d017340_P002	Maize	cytosol	15.56	21.05
Zm00001d022131_P001	Maize	mitochondrion	20.23	16.35
Zm00001d051211_P008	Maize	cytosol	28.79	15.74

Protein Annotations

EntrezGene:100283656	MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	UniProt:A0A1D6N969	ncoils:Coil	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
ProteinID:ONM37091.1	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF101	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235
UniParc:UPI0008444C4B	EnsemblPlantsGene:Zm00001d043137	EnsemblPlants:Zm00001d043137_P004	EnsemblPlants:Zm00001d043137_T004	:	:

Description

Proteasome subunit alpha type

Coordinates

chr3:-:189988087..189993149

Molecular Weight (calculated)

28217.8 Da

IEP (calculated)

6.626

GRAVY (calculated)

-0.207

Length

257 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQVEYATKA VDNSGTVVGI KCKDGIVLGV EKLVTSKMML EGSNRRIHSV HRHSGLVMPL QANQAVAGLA ADGRQIVSRT
101: KSEAASYEKV YGEPISVKEL ADRVASYVHL CTLYWWLRPF GCGVILGGYD RDGPQLYMIE PSGVSYKYFG AALGKGRQAA KTEIEKLKLS ELTCREGIVE
201: VAKIIYAVHD EAKDKAFELE LSWICEESKR QHQKVPNDLL EHAKAAAQTA LEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.2 )
(BLAST)

001: MWLIIQNYTK EENHLKIFTI PLKDYQRMGQ IIILIKPVNN RIDPPDKTTR IVLISNPESD GAPKIWLVSG LRTKKTPFFD LSLNHSTKKK SEKSQRKKKS
101: RKMSSIGTGY DLSVTTFSPD GRVFQIEYAA KAVDNSGTVV GIKCKDGIVM GVEKLIASKM MLPGSNRRIH SVHRHAGMAV AGLAADGRQI VARAKSEARS
201: YESVYGDAVP VKELSERVAS YVHLCTLYWW LRPFGCGVIL GGYDRDGPQL YMIEPSGISY RYFGAAIGKG KQAAKTEIEK LNLSEMTCKE GVIEVAKIIY
301: KLHDEAKDKA FELEMSWICE ESKREHQKVP DDLLEEAKTA AKTALEEMDA D

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.