Factsheet for Zm00001d034938_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	peroxisome
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57899	Soybean	cytosol	39.0	25.49
Zm00001d006235_P001	Maize	cytosol, extracellular	48.0	19.28
Zm00001d022629_P001	Maize	cytosol	48.0	19.28
Zm00001d053217_P001	Maize	cytosol, extracellular	47.0	18.88
Zm00001d048271_P001	Maize	cytosol, extracellular	30.0	12.2
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	30.0	12.2
Zm00001d012546_P002	Maize	cytosol	30.0	11.72
Zm00001d043137_P004	Maize	cytosol	30.0	11.67
Zm00001d027688_P002	Maize	peroxisome	26.0	10.97
Zm00001d022316_P001	Maize	cytosol	29.0	10.55
Zm00001d036319_P001	Maize	cytosol	25.0	10.0
Zm00001d045194_P001	Maize	extracellular	25.0	10.0
Zm00001d048403_P001	Maize	extracellular	26.0	8.87
Zm00001d017338_P006	Maize	cytosol	21.0	8.75
Zm00001d017336_P007	Maize	cytosol	21.0	8.75
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	23.0	8.39
Zm00001d022131_P001	Maize	mitochondrion	26.0	8.18
Zm00001d007038_P001	Maize	cytosol	30.0	7.73
Zm00001d051211_P008	Maize	cytosol	21.0	4.47
Zm00001d017340_P002	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.60.20.10	MapMan:35.1	UniProt:A0A1D6LCR1	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824
GO:GO:0004175	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019773	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	ProteinID:ONM11836.1	PFAM:PF10584	PANTHER:PTHR11599
PANTHER:PTHR11599:SF106	InterPro:Proteasome_asu_N	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI0008429164	EnsemblPlantsGene:Zm00001d034938
EnsemblPlants:Zm00001d034938_P001	EnsemblPlants:Zm00001d034938_T001	SEG:seg	:	:	:

Description

Proteasome subunit alpha type-7-A

Coordinates

chr1:+:306108762..306109064

Molecular Weight (calculated)

10705.9 Da

IEP (calculated)

10.978

GRAVY (calculated)

-0.483

Length

100 amino acids

Sequence
(BLAST)

1: MPPREPPARR LPAAIPSPSP PRTPPHTPPP SVGKQAQTLT AGDASTMARY DRAITVFNPD GHLFQVEYAL QAVRKGNTVV GVRGTDTIVL SVEKKSTPKL

Best Arabidopsis Sequence Match ( AT3G51260.1 )
(BLAST)

001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD TVVLAVEKKS TPKLQDSRSA RKIVSLDNHI ALACAGLKAD ARVLINKARI ECQSHRLTLE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TRIPALYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SAGQETVKLA IRALLEVVES
201: GGKNIEVAVM TREEGVLKQL EEEEIDIIVA EIEAEKAAAE AAKKGPAKET

Arabidopsis Description

PAD1Proteasome endopeptidase complex [Source:UniProtKB/TrEMBL;Acc:A0A178VPE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.