Factsheet for Zm00001d027688_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
mitochondrion 2
peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10115	Sorghum	peroxisome	100.0	100.0
Os11t0615700-01	Rice	peroxisome	98.73	98.73
TraesCS5B01G114000.1	Wheat	golgi, plastid, unclear	97.89	97.89
GSMUA_Achr10P...	Banana	peroxisome	96.62	96.62
GSMUA_Achr11P...	Banana	peroxisome	96.62	96.62
TraesCS4B01G151700.1	Wheat	golgi, unclear	96.62	96.62
TraesCS4D01G157700.1	Wheat	peroxisome	96.62	96.62
HORVU4Hr1G040770.1	Barley	cytosol	96.2	96.2
KRG90710	Soybean	peroxisome	96.2	96.2
KRH36037	Soybean	endoplasmic reticulum, nucleus	96.2	96.2
KRH69234	Soybean	endoplasmic reticulum	96.2	96.2
TraesCS4A01G167300.1	Wheat	peroxisome	95.36	95.36
KRH31817	Soybean	cytosol	95.36	95.36
Solyc02g070510.2.1	Tomato	nucleus	94.51	94.51
PGSC0003DMT400054523	Potato	cytosol	94.51	94.51
AT1G53850.1	Thale cress	cytosol	94.51	94.51
AT3G14290.1	Thale cress	cytosol	94.09	94.09
Solyc08g016510.2.1	Tomato	extracellular	93.67	93.67
Bra030921.1-P	Field mustard	cytosol	93.67	93.67
PGSC0003DMT400024982	Potato	cytosol, nucleus, peroxisome	93.67	93.67
TraesCS5D01G121300.1	Wheat	peroxisome	90.72	90.72
CDY08208	Canola	peroxisome	92.41	89.75
TraesCS5A01G109000.1	Wheat	peroxisome	73.0	89.18
CDY51800	Canola	peroxisome	92.41	87.6
Zm00001d048403_P001	Maize	extracellular	99.16	80.2
CDY02493	Canola	mitochondrion	93.67	79.29
CDY25683	Canola	cytosol, plastid	93.67	78.45
VIT_09s0002g00350.t01	Wine grape	endoplasmic reticulum	96.2	77.82
GSMUA_Achr6P10850_001	Banana	mitochondrion	91.98	71.48
Zm00001d053217_P001	Maize	cytosol, extracellular	40.08	38.15
Zm00001d045194_P001	Maize	extracellular	40.08	38.0
Zm00001d036319_P001	Maize	cytosol	40.08	38.0
Zm00001d022629_P001	Maize	cytosol	39.24	37.35
Zm00001d006235_P001	Maize	cytosol, extracellular	38.82	36.95
Zm00001d017336_P007	Maize	cytosol	34.18	33.75
Zm00001d017338_P006	Maize	cytosol	34.18	33.75
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	35.87	31.02
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	32.07	30.89
Zm00001d048271_P001	Maize	cytosol, extracellular	32.07	30.89
Zm00001d012546_P002	Maize	cytosol	29.96	27.73
Zm00001d043137_P004	Maize	cytosol	29.54	27.24
Zm00001d034938_P001	Maize	cytosol	10.97	26.0
Zm00001d022316_P001	Maize	cytosol	29.96	25.82
Zm00001d017340_P002	Maize	cytosol	19.83	24.74
Zm00001d022131_P001	Maize	mitochondrion	25.32	18.87
Zm00001d007038_P001	Maize	cytosol	29.96	18.3
Zm00001d051211_P008	Maize	cytosol	33.76	17.02

Protein Annotations

EntrezGene:100283546	MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	UniProt:B6TJB6	EMBL:BT062530	EMBL:EU965081
GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0043161	GO:GO:0051603	InterPro:IPR023332
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	ProteinID:ONL93688.1	ProteinID:ONL93691.1	PFAM:PF00227	PFAM:PF10584
ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type	InterPro:Proteasome_alpha_type_5
InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI000182D760	EnsemblPlantsGene:Zm00001d027688
EnsemblPlants:Zm00001d027688_P002	EnsemblPlants:Zm00001d027688_T002	:	:	:	:

Description

Proteasome subunit alpha type

Coordinates

chr1:-:11158115..11165101

Molecular Weight (calculated)

25978.8 Da

IEP (calculated)

4.468

GRAVY (calculated)

-0.221

Length

237 amino acids

Sequence
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGL KTKDGVVLAV EKRVTSPLLE PSSVEKIMEI DEHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE SSTQAICDLA LRFGEGDEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQYNKELTLQ EAETIALSIL
201: KQVMEEKVTP NNVDIAKVAP KYHLYTPAEV EAVIARL

Best Arabidopsis Sequence Match ( AT1G53850.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDLSLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVIARL

Arabidopsis Description

PAE1Proteasome subunit alpha type-5-A [Source:UniProtKB/Swiss-Prot;Acc:O81149]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.