Factsheet for Zm00001d017338_P006

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017336_P007	Maize	cytosol	100.0	100.0
EES05472	Sorghum	cytosol	97.92	100.0
TraesCS2B01G217800.1	Wheat	cytosol	95.83	97.87
TraesCS2A01G189400.1	Wheat	cytosol	95.83	97.87
HORVU3Hr1G068660.1	Barley	cytosol	95.83	97.87
TraesCS2D01G198400.1	Wheat	cytosol	95.83	97.87
TraesCS3A01G285600.1	Wheat	cytosol	95.83	97.87
TraesCS3D01G285400.1	Wheat	cytosol	95.42	97.45
Os02t0634900-01	Rice	cytosol, plasma membrane	95.42	97.45
TraesCS3B01G319500.1	Wheat	cytosol	95.83	95.04
GSMUA_Achr5P19360_001	Banana	cytosol	90.0	91.91
VIT_01s0011g01960.t01	Wine grape	cytosol	89.58	91.49
PGSC0003DMT400027339	Potato	cytosol	89.17	91.06
GSMUA_Achr8P13980_001	Banana	cytosol	89.17	91.06
KRH75739	Soybean	cytosol, endoplasmic reticulum, nucleus	89.17	91.06
Solyc10g008010.2.1	Tomato	extracellular, plastid	89.17	91.06
KRH43728	Soybean	cytosol, endoplasmic reticulum, nucleus	89.17	91.06
CDY26894	Canola	cytosol	89.17	91.06
CDY22253	Canola	cytosol	89.17	91.06
CDX79306	Canola	cytosol	89.17	91.06
CDX68003	Canola	cytosol, extracellular	89.17	91.06
Bra035099.1-P	Field mustard	cytosol	89.17	91.06
Bra008402.1-P	Field mustard	cytosol	89.17	91.06
AT1G16470.2	Thale cress	cytosol	89.17	91.06
KRH13728	Soybean	cytosol	88.75	90.64
KRH65961	Soybean	cytosol	88.75	90.64
AT1G79210.1	Thale cress	cytosol	88.33	90.21
PGSC0003DMT400052657	Potato	cytosol	87.5	89.36
Solyc07g055080.2.1	Tomato	cytosol, endoplasmic reticulum	87.08	88.94
Bra003618.1-P	Field mustard	cytosol	89.17	87.35
HORVU2Hr1G036390.6	Barley	plastid	92.08	81.85
Zm00001d017340_P002	Maize	cytosol	60.0	75.79
CDX88517	Canola	cytosol	89.17	69.71
CDX87400	Canola	extracellular	89.17	66.88
Zm00001d051211_P008	Maize	cytosol	98.33	50.21
Zm00001d053217_P001	Maize	cytosol, extracellular	37.08	35.74
Zm00001d022629_P001	Maize	cytosol	36.67	35.34
Zm00001d006235_P001	Maize	cytosol, extracellular	36.25	34.94
Zm00001d027688_P002	Maize	peroxisome	33.75	34.18
Zm00001d036319_P001	Maize	cytosol	35.0	33.6
Zm00001d045194_P001	Maize	extracellular	35.0	33.6
Zm00001d048271_P001	Maize	cytosol, extracellular	32.92	32.11
Zm00001d027896_P001	Maize	cytosol, extracellular, mitochondrion	32.5	31.71
Zm00001d012546_P002	Maize	cytosol	32.08	30.08
Zm00001d015180_P001	Maize	extracellular, mitochondrion, plasma membrane	32.92	28.83
Zm00001d043137_P004	Maize	cytosol	30.83	28.79
Zm00001d048403_P001	Maize	extracellular	33.75	27.65
Zm00001d022316_P001	Maize	cytosol	31.25	27.27
Zm00001d034938_P001	Maize	cytosol	8.75	21.0
Zm00001d007038_P001	Maize	cytosol	31.67	19.59
Zm00001d022131_P001	Maize	mitochondrion	25.83	19.5

Protein Annotations

EntrezGene:100193683	MapMan:19.2.6.1.1.2	Gene3D:3.60.20.10	UniProt:A0A1D6HE64	ProteinID:AQK72939.1	ProteinID:AQK72943.1
GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599
PANTHER:PTHR11599:SF16	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	InterPro:Proteasome_subunit_alpha2	SMART:SM00948
SUPFAM:SSF56235	UniParc:UPI000843ECF4	EnsemblPlantsGene:Zm00001d017338	EnsemblPlants:Zm00001d017338_P006	EnsemblPlants:Zm00001d017338_T006	:

Description

Proteasome subunit alpha type-2-B

Coordinates

chr5:-:193306421..193314051

Molecular Weight (calculated)

26499.6 Da

IEP (calculated)

5.787

GRAVY (calculated)

-0.240

Length

240 amino acids

Sequence
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA ANGVVIATEK KLPSILVDET SVQKIQALTP NIGVVYSGMG PDFRVLVRKS RKQAQQYYRL
101: YKEHIPVTQL VRETAAVMQE FTQSGGVRPF GVSLLIAGYD DNGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGSW
201: TCRYEGQISS NNIEIGIIRA DREFKVLSPA EIKDFLEEVE

Best Arabidopsis Sequence Match ( AT1G16470.1 )
(BLAST)

001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA SNGVVIATEK KLPSILVDEA SVQKIQHLTP NIGVVYSGMG PDFRVLVRKS RKQAEQYLRL
101: YKEPIPVTQL VRETATVMQE FTQSGGVRPF GVSLLVAGYD DKGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGFE
201: GEISSKNIEI GKIGADKVFR VLTPAEIDDY LAEVE

Arabidopsis Description

PAB1Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A178WA13]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.