Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G189400.1 | Wheat | cytosol | 83.7 | 96.17 |
| TraesCS2B01G217800.1 | Wheat | cytosol | 83.7 | 96.17 |
| TraesCS2D01G198400.1 | Wheat | cytosol | 83.7 | 96.17 |
| HORVU3Hr1G068660.1 | Barley | cytosol | 83.7 | 96.17 |
| Os02t0634900-01 | Rice | cytosol, plasma membrane | 83.33 | 95.74 |
| EES05472 | Sorghum | cytosol | 81.85 | 94.04 |
| Zm00001d017336_P007 | Maize | cytosol | 81.85 | 92.08 |
| Zm00001d017338_P006 | Maize | cytosol | 81.85 | 92.08 |
| GSMUA_Achr5P19360_001 | Banana | cytosol | 76.67 | 88.09 |
| CDX79306 | Canola | cytosol | 75.93 | 87.23 |
| KRH75739 | Soybean | cytosol, endoplasmic reticulum, nucleus | 75.93 | 87.23 |
| Bra008402.1-P | Field mustard | cytosol | 75.93 | 87.23 |
| VIT_01s0011g01960.t01 | Wine grape | cytosol | 75.93 | 87.23 |
| Bra035099.1-P | Field mustard | cytosol | 75.93 | 87.23 |
| Solyc10g008010.2.1 | Tomato | extracellular, plastid | 75.93 | 87.23 |
| PGSC0003DMT400027339 | Potato | cytosol | 75.93 | 87.23 |
| AT1G16470.2 | Thale cress | cytosol | 75.93 | 87.23 |
| CDY26894 | Canola | cytosol | 75.93 | 87.23 |
| CDY22253 | Canola | cytosol | 75.93 | 87.23 |
| KRH43728 | Soybean | cytosol, endoplasmic reticulum, nucleus | 75.93 | 87.23 |
| CDX68003 | Canola | cytosol, extracellular | 75.93 | 87.23 |
| KRH13728 | Soybean | cytosol | 75.56 | 86.81 |
| KRH65961 | Soybean | cytosol | 75.56 | 86.81 |
| AT1G79210.1 | Thale cress | cytosol | 75.19 | 86.38 |
| GSMUA_Achr8P13980_001 | Banana | cytosol | 75.19 | 86.38 |
| PGSC0003DMT400052657 | Potato | cytosol | 74.07 | 85.11 |
| Solyc07g055080.2.1 | Tomato | cytosol, endoplasmic reticulum | 73.7 | 84.68 |
| Bra003618.1-P | Field mustard | cytosol | 75.93 | 83.67 |
| Zm00001d017340_P002 | Maize | cytosol | 52.22 | 74.21 |
| CDX88517 | Canola | cytosol | 76.3 | 67.1 |
| HORVU3Hr1G068630.1 | Barley | mitochondrion | 37.04 | 65.79 |
| CDX87400 | Canola | extracellular | 76.3 | 64.38 |
| Zm00001d051211_P008 | Maize | cytosol | 81.48 | 46.81 |
| HORVU6Hr1G051730.1 | Barley | cytosol | 17.04 | 37.1 |
| HORVU5Hr1G083350.1 | Barley | cytosol | 32.22 | 34.94 |
| HORVU4Hr1G040770.1 | Barley | cytosol | 27.78 | 31.65 |
| HORVU7Hr1G057390.2 | Barley | cytosol, nucleus, plastid | 31.85 | 30.28 |
| HORVU7Hr1G027220.2 | Barley | cytosol | 29.63 | 30.19 |
| HORVU5Hr1G038710.1 | Barley | cytosol | 20.74 | 28.14 |
| HORVU1Hr1G068490.1 | Barley | cytosol | 25.56 | 27.71 |
| HORVU0Hr1G001180.1 | Barley | cytosol | 25.56 | 27.71 |
| HORVU4Hr1G076770.2 | Barley | cytosol | 28.52 | 27.3 |
| HORVU6Hr1G017500.1 | Barley | cytosol | 26.67 | 25.0 |
| HORVU5Hr1G076600.1 | Barley | plastid | 23.33 | 24.32 |
| HORVU4Hr1G042970.6 | Barley | cytosol, golgi, nucleus | 22.96 | 18.96 |
Protein Annotations
| MapMan:19.2.6.1.1.2 | Gene3D:3.60.20.10 | UniProt:A0A287HPZ3 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005839 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 | GO:GO:0051603 | EnsemblPlantsGene:HORVU2Hr1G036390 | EnsemblPlants:HORVU2Hr1G036390.6 |
| InterPro:IPR023332 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PFscan:PS51475 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF16 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_sua/b | InterPro:Proteasome_subunit_alpha2 | SUPFAM:SSF56235 | UniParc:UPI000B470F92 |
Description
Proteasome endopeptidase complex [Source:UniProtKB/TrEMBL;Acc:A0A287HPZ3]
Coordinates
chrchr2H:+:160984226..160994993
Molecular Weight (calculated)
29692.6 Da
IEP (calculated)
7.194
GRAVY (calculated)
-0.223
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: CIYGLGPLFS FLQQPPCSFH PISSHNNSKT PPTCHGRQPV LLLPHHLQSP SGKLVQIEHA LTAVGSGQTS LGIKAANGVV IATEKKLPSI LVDETSVQKI
101: QSLTPNIGVV YSGMGPDFRV LVRKSRKQAQ QYYRLYKETI PVTQLVRETA AVMQEFTQSG GVRPFGVSLL IAGYDDNGPQ LYQVDPSGSY FSWKASAMGK
201: NVSNAKTFLE KRYTEDMELD DAIHTAILTL KEGYEGQISA NNIEIGVIRA DREFKVLTPA EIKDFLEEVE
101: QSLTPNIGVV YSGMGPDFRV LVRKSRKQAQ QYYRLYKETI PVTQLVRETA AVMQEFTQSG GVRPFGVSLL IAGYDDNGPQ LYQVDPSGSY FSWKASAMGK
201: NVSNAKTFLE KRYTEDMELD DAIHTAILTL KEGYEGQISA NNIEIGVIRA DREFKVLTPA EIKDFLEEVE
001: MGDSQYSFSL TTFSPSGKLV QIEHALTAVG SGQTSLGIKA SNGVVIATEK KLPSILVDEA SVQKIQHLTP NIGVVYSGMG PDFRVLVRKS RKQAEQYLRL
101: YKEPIPVTQL VRETATVMQE FTQSGGVRPF GVSLLVAGYD DKGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGFE
201: GEISSKNIEI GKIGADKVFR VLTPAEIDDY LAEVE
101: YKEPIPVTQL VRETATVMQE FTQSGGVRPF GVSLLVAGYD DKGPQLYQVD PSGSYFSWKA SAMGKNVSNA KTFLEKRYTE DMELDDAIHT AILTLKEGFE
201: GEISSKNIEI GKIGADKVFR VLTPAEIDDY LAEVE
Arabidopsis Description
PAB1Proteasome subunit alpha type [Source:UniProtKB/TrEMBL;Acc:A0A178WA13]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.