Factsheet for TraesCS4A01G167300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G157700.1	Wheat	peroxisome	97.89	97.89
TraesCS4B01G151700.1	Wheat	golgi, unclear	97.89	97.89
HORVU4Hr1G040770.1	Barley	cytosol	97.47	97.47
Os11t0615700-01	Rice	peroxisome	96.2	96.2
GSMUA_Achr11P...	Banana	peroxisome	95.36	95.36
OQU93221	Sorghum	cytosol	95.36	95.36
GSMUA_Achr10P...	Banana	peroxisome	95.36	95.36
EES10115	Sorghum	peroxisome	95.36	95.36
Zm00001d027688_P002	Maize	peroxisome	95.36	95.36
KRG90710	Soybean	peroxisome	94.51	94.51
KRH36037	Soybean	endoplasmic reticulum, nucleus	94.51	94.51
KRH69234	Soybean	endoplasmic reticulum	94.51	94.51
PGSC0003DMT400054523	Potato	cytosol	94.09	94.09
Solyc02g070510.2.1	Tomato	nucleus	94.09	94.09
KRH31817	Soybean	cytosol	93.67	93.67
PGSC0003DMT400024982	Potato	cytosol, nucleus, peroxisome	93.25	93.25
Solyc08g016510.2.1	Tomato	extracellular	93.25	93.25
AT3G14290.1	Thale cress	cytosol	91.98	91.98
Bra030921.1-P	Field mustard	cytosol	91.98	91.98
AT1G53850.1	Thale cress	cytosol	91.56	91.56
CDY08208	Canola	peroxisome	90.72	88.11
TraesCS5A01G109000.1	Wheat	peroxisome	70.89	86.6
CDY51800	Canola	peroxisome	90.72	86.0
CDY02493	Canola	mitochondrion	91.98	77.86
CDY25683	Canola	cytosol, plastid	91.98	77.03
Zm00001d048403_P001	Maize	extracellular	94.94	76.79
VIT_09s0002g00350.t01	Wine grape	endoplasmic reticulum	93.67	75.77
GSMUA_Achr6P10850_001	Banana	mitochondrion	89.87	69.84
TraesCS7A01G130500.1	Wheat	plastid	39.66	37.6
TraesCS5A01G329300.1	Wheat	cytosol	38.4	36.55
TraesCS7A01G272000.1	Wheat	cytosol	38.4	36.55
TraesCS2A01G189400.1	Wheat	cytosol	32.91	33.19
TraesCS3A01G285600.1	Wheat	cytosol	32.91	33.19
TraesCS4A01G008300.1	Wheat	cytosol, golgi, plastid, unclear	32.07	30.89
TraesCS6A01G097800.1	Wheat	unclear	35.87	29.51
TraesCS1A01G308400.1	Wheat	cytosol	29.96	28.51
TraesCS5A01G287400.1	Wheat	cytosol, golgi, unclear	29.96	28.51
TraesCS2A01G170100.1	Wheat	mitochondrion	27.43	24.25

Protein Annotations

MapMan:19.2.6.1.1.5	Gene3D:3.60.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005839	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773
GO:GO:0043161	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227
PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF14	InterPro:Proteasome_alpha-type
InterPro:Proteasome_alpha_type_5	InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS4A01G167300
EnsemblPlants:TraesCS4A01G167300.1	TIGR:cd03753	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:413577013..413580882

Molecular Weight (calculated)

25968.7 Da

IEP (calculated)

4.468

GRAVY (calculated)

-0.192

Length

237 amino acids

Sequence
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGL MTKDGVVLAV EKRVTSPLLE PSSVEKIMEI DEHVGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQAICDLA LRFGEGDEES MSRPFGVSLL IAGHDEHGPS LYYTDPSGTF WQCKAKAIGS GSEGADSSLQ EQYNKELTIA EAETIALSIL
201: KQVMEEKVTP NNVDIAKVSP SYHLYTPSEV EAVISRL

Best Arabidopsis Sequence Match ( AT3G14290.1 )
(BLAST)

001: MFLTRTEYDR GVNTFSPEGR LFQVEYAIEA IKLGSTAIGV KTKEGVVLAV EKRITSPLLE PSSVEKIMEI DDHIGCAMSG LIADARTLVE HARVETQNHR
101: FSYGEPMTVE STTQALCDLA LRFGEGEEES MSRPFGVSLL IAGHDENGPS LYYTDPSGTF WQCNAKAIGS GSEGADSSLQ EQFNKDITLQ EAETIAVSIL
201: KQVMEEKVTP NNVDIAKVAP AYHLYTPQEV EAVISRL

Arabidopsis Description

PAE2Proteasome subunit alpha type-5-B [Source:UniProtKB/Swiss-Prot;Acc:Q42134]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.