Factsheet for TraesCS1A01G308400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G307800.1	Wheat	cytosol	99.6	99.6
TraesCS1B01G319100.1	Wheat	cytosol	99.6	99.6
HORVU0Hr1G001180.1	Barley	cytosol	99.2	99.2
HORVU1Hr1G068490.1	Barley	cytosol	99.2	99.2
TraesCS5A01G287400.1	Wheat	cytosol, golgi, unclear	98.39	98.39
Os05t0490800-01	Rice	cytosol, plasma membrane	95.18	95.18
PGSC0003DMT400018521	Potato	cytosol	87.55	87.55
Solyc10g077030.1.1	Tomato	extracellular	87.15	87.15
PGSC0003DMT400072226	Potato	cytosol	87.15	87.15
GSMUA_Achr4P10040_001	Banana	cytosol	86.75	86.75
KRG94269	Soybean	cytosol	86.75	86.75
Solyc10g081130.1.1	Tomato	extracellular, plastid	86.35	86.35
VIT_08s0040g00410.t01	Wine grape	cytosol	85.94	85.94
GSMUA_Achr8P23960_001	Banana	cytosol	85.94	85.94
CDY48190	Canola	cytosol	81.93	81.93
CDY04473	Canola	cytosol	81.93	81.93
Bra034316.1-P	Field mustard	cytosol	81.93	81.93
CDX71476	Canola	cytosol	81.53	81.53
CDX77059	Canola	cytosol	81.12	81.12
KRH57704	Soybean	cytosol, endoplasmic reticulum	81.93	78.16
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	81.93	58.12
TraesCS3A01G285600.1	Wheat	cytosol	29.72	31.49
TraesCS2A01G189400.1	Wheat	cytosol	29.72	31.49
TraesCS4A01G008300.1	Wheat	cytosol, golgi, plastid, unclear	30.92	31.3
TraesCS7A01G130500.1	Wheat	plastid	31.33	31.2
TraesCS5A01G329300.1	Wheat	cytosol	30.12	30.12
TraesCS7A01G272000.1	Wheat	cytosol	30.12	30.12
TraesCS4A01G167300.1	Wheat	peroxisome	28.51	29.96
TraesCS6A01G097800.1	Wheat	unclear	32.93	28.47
TraesCS2A01G170100.1	Wheat	mitochondrion	24.5	22.76
TraesCS5A01G109000.1	Wheat	peroxisome	16.47	21.13

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005839	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227
PFAM:PF10584	ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF101	InterPro:Proteasome_alpha-type
InterPro:Proteasome_asu_N	InterPro:Proteasome_sua/b	SMART:SM00948	SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS1A01G308400	EnsemblPlants:TraesCS1A01G308400.1
TIGR:cd03751	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:499632186..499635199

Molecular Weight (calculated)

27153.4 Da

IEP (calculated)

6.048

GRAVY (calculated)

-0.210

Length

249 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQVEYAGKA VDNSGTIVGI KCKDGVVLGV EKLITSKMIL AGSNRRLHSV HRNSGLAVAG LAADGRQVVS RAKSEAANYE
101: KVYGEPMPVK ELADRVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGLSYKY FGAALGKGRQ AAKTEIEKLK LSELTCREGI VEVAKIIYGV
201: HDEAKDKSFE LELSWVCDES NRQHEKVPND LLEQAKAAAQ AALEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.1 )
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQIEYAAKA VDNSGTVVGI KCKDGIVMGV EKLIASKMML PGSNRRIHSV HRHAGMAVAG LAADGRQIVA RAKSEARSYE
101: SVYGDAVPVK ELSERVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGISYRY FGAAIGKGKQ AAKTEIEKLN LSEMTCKEGV IEVAKIIYKL
201: HDEAKDKAFE LEMSWICEES KREHQKVPDD LLEEAKTAAK TALEEMDAD

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.