Factsheet for Os05t0490800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G295300.1	Wheat	cytosol	95.58	95.58
TraesCS5B01G286900.1	Wheat	cytosol	95.58	95.58
TraesCS5A01G287400.1	Wheat	cytosol, golgi, unclear	95.58	95.58
TraesCS1D01G307800.1	Wheat	cytosol	95.58	95.58
TraesCS1B01G319100.1	Wheat	cytosol	95.58	95.58
TraesCS1A01G308400.1	Wheat	cytosol	95.18	95.18
HORVU0Hr1G001180.1	Barley	cytosol	95.18	95.18
HORVU1Hr1G068490.1	Barley	cytosol	95.18	95.18
Os01t0811100-01	Rice	cytosol	93.57	93.57
PGSC0003DMT400018521	Potato	cytosol	88.35	88.35
Solyc10g077030.1.1	Tomato	extracellular	87.95	87.95
PGSC0003DMT400072226	Potato	cytosol	87.55	87.55
GSMUA_Achr4P10040_001	Banana	cytosol	87.15	87.15
Solyc10g081130.1.1	Tomato	extracellular, plastid	86.75	86.75
KRG94269	Soybean	cytosol	86.35	86.35
GSMUA_Achr8P23960_001	Banana	cytosol	86.35	86.35
VIT_08s0040g00410.t01	Wine grape	cytosol	85.94	85.94
Bra034316.1-P	Field mustard	cytosol	83.53	83.53
CDY04473	Canola	cytosol	83.53	83.53
CDY48190	Canola	cytosol	83.53	83.53
CDX71476	Canola	cytosol	83.13	83.13
CDX77059	Canola	cytosol	82.73	82.73
KRH57704	Soybean	cytosol, endoplasmic reticulum	81.12	77.39
AT2G27020.2	Thale cress	cytoskeleton, cytosol, nucleus	84.34	59.83
Os06t0167600-01	Rice	cytosol	31.33	31.2
Os08t0548900-01	Rice	plastid	30.92	30.92
Os06t0177100-01	Rice	plastid	30.92	30.8
Os06t0176000-01	Rice	cytosol	30.92	30.8
Os02t0133800-01	Rice	plastid	33.33	30.74
Os09t0538200-01	Rice	cytosol, plastid	30.52	30.52
Os11t0615700-01	Rice	peroxisome	28.92	30.38
Os02t0634900-01	Rice	cytosol, plasma membrane	28.51	30.21
Os03t0387100-01	Rice	cytosol, plasma membrane	28.51	30.21
Os03t0180400-01	Rice	cytosol	28.51	28.86
Os07t0614100-01	Rice	cytosol	21.29	20.95

Protein Annotations

MapMan:19.2.6.1.1.7	Gene3D:3.60.20.10	EntrezGene:4339169	ProteinID:AAT69640.1	EMBL:AK240917	ProteinID:BAS94660.1
ProteinID:EEE64190.1	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839
GO:GO:0006508	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	GO:GO:0051603	InterPro:IPR023332
InterPro:IPR029055	InterPro:Ntn_hydrolases_N	EnsemblPlantsGene:Os05g0490800	EnsemblPlants:Os05t0490800-01	PFAM:PF00227	PFAM:PF10584
ScanProsite:PS00388	PFscan:PS51475	PANTHER:PTHR11599	PANTHER:PTHR11599:SF101	InterPro:Proteasome_alpha-type	InterPro:Proteasome_asu_N
InterPro:Proteasome_sua/b	UniProt:Q6F321	SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI00003BF57A	RefSeq:XP_015637653.1
SEG:seg	:	:	:	:	:

Description

Similar to Proteasome subunit alpha type. (Os05t0490800-01)

Coordinates

chr5:-:24122525..24126672

Molecular Weight (calculated)

27221.5 Da

IEP (calculated)

5.976

GRAVY (calculated)

-0.230

Length

249 amino acids

Sequence
(BLAST)

001: MSSIGTGYDL SVTTFSPDGR VFQVEYAGKA VDNSGTVVGI KCKDGIVLGV EKLVTSKMIL KGSNRRLHSV HRHSGLAVAG LAADGRQIVS RAKSEAASYE
101: KVYGEPMPVK ELADRVASYV HLCTLYWWLR PFGCGVILGG YDRDGPQLYM IEPSGLSYKY FGAALGKGRQ AAKTEIEKLN LSELTCREGI VEVAKIIYGV
201: HDEAKDKDFE LELSWVCDES KRQHEKVPDD LVEQAKAAAQ AALEEMDAD

Best Arabidopsis Sequence Match ( AT2G27020.2 )
(BLAST)

001: MWLIIQNYTK EENHLKIFTI PLKDYQRMGQ IIILIKPVNN RIDPPDKTTR IVLISNPESD GAPKIWLVSG LRTKKTPFFD LSLNHSTKKK SEKSQRKKKS
101: RKMSSIGTGY DLSVTTFSPD GRVFQIEYAA KAVDNSGTVV GIKCKDGIVM GVEKLIASKM MLPGSNRRIH SVHRHAGMAV AGLAADGRQI VARAKSEARS
201: YESVYGDAVP VKELSERVAS YVHLCTLYWW LRPFGCGVIL GGYDRDGPQL YMIEPSGISY RYFGAAIGKG KQAAKTEIEK LNLSEMTCKE GVIEVAKIIY
301: KLHDEAKDKA FELEMSWICE ESKREHQKVP DDLLEEAKTA AKTALEEMDA D

Arabidopsis Description

PAG120S proteasome alpha subunit G1 [Source:TAIR;Acc:AT2G27020]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.