CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034938_P001	Maize	cytosol	25.49	39.0
KRH08047	Soybean	cytosol, endoplasmic reticulum, nucleus	41.83	25.7
KRH69759	Soybean	endoplasmic reticulum, nucleus	41.83	25.7
KRH00322	Soybean	cytosol	26.14	16.0
KRH76017	Soybean	cytosol	26.14	16.0
KRH65617	Soybean	nucleus	26.14	16.0
KRH49455	Soybean	endoplasmic reticulum, nucleus	26.14	16.0
KRH55422	Soybean	cytosol, endoplasmic reticulum	24.84	15.45
KRH26034	Soybean	nucleus	24.84	15.45
KRG94269	Soybean	cytosol	24.84	15.26
KRH57704	Soybean	cytosol, endoplasmic reticulum	24.84	14.56
KRH43728	Soybean	cytosol, endoplasmic reticulum, nucleus	22.22	14.47
KRH65961	Soybean	cytosol	22.22	14.47
KRH13728	Soybean	cytosol	22.22	14.47
KRH75739	Soybean	cytosol, endoplasmic reticulum, nucleus	22.22	14.47
KRH36037	Soybean	endoplasmic reticulum, nucleus	22.22	14.35
KRH31817	Soybean	cytosol	22.22	14.35
KRH69234	Soybean	endoplasmic reticulum	22.22	14.35
KRG90710	Soybean	peroxisome	22.22	14.35
KRH05846	Soybean	cytosol, nucleus	22.88	12.32
KRH38836	Soybean	cytosol, nucleus	22.88	12.28
KRH15173	Soybean	cytosol, nucleus	22.88	12.15
KRH20407	Soybean	cytosol	5.23	5.23

Protein Annotations

Gene3D:3.60.20.10	MapMan:35.1	UniProt:A0A0R0JZP9	EMBL:ACUP02003120	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G091300
GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0019773	InterPro:IPR029055	EnsemblPlants:KRH57899	ProteinID:KRH57899
ProteinID:KRH57899.1	InterPro:Ntn_hydrolases_N	PFAM:PF10584	PANTHER:PTHR11599	PANTHER:PTHR11599:SF106	InterPro:Proteasome_asu_N
SMART:SM00948	SUPFAM:SSF56235	UniParc:UPI0006EDBD05	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:22016429..22019698

Molecular Weight (calculated)

17817.4 Da

IEP (calculated)

7.751

GRAVY (calculated)

-0.462

Length

153 amino acids

Sequence
(BLAST)

001: MARYDRAITV FSPDGHLFQV QYALKAVRKG NAIIGIRDID NVVLGIEKKS NAKLQDSRGI RDFLLFTKEK YNNPLIYITE NERYEEWSLQ LASKEQKIAD
101: ENVLRLVEEQ KREKEEAYNK ILHLEKQLDF SIHIKLATTI SSLAFDKLFG LQD

Best Arabidopsis Sequence Match ( AT5G66140.1 )
(BLAST)

001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD TVVLAVEKKS TPKLQDSRSA RKIVSLDNHI ALACAGLKAD ARVLINKARI ECQSHRLTLE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY SRLPSLYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SSGQETIKLA IRALLEVVES
201: GGKNIEVAVM TREETGLRQL EEAEIDAIVA KIEAEKAAAE AAKKGPPKET

Arabidopsis Description

PAD2Proteasome subunit alpha type-7-B [Source:UniProtKB/Swiss-Prot;Acc:O24616]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.