Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77988 | Canola | cytosol, extracellular | 96.0 | 96.0 |
| Bra036824.1-P | Field mustard | cytosol | 96.0 | 96.0 |
| Bra012861.1-P | Field mustard | cytosol | 96.0 | 96.0 |
| CDY29009 | Canola | cytosol | 95.6 | 95.6 |
| CDX90655 | Canola | cytosol | 95.6 | 95.6 |
| CDX73737 | Canola | cytosol, extracellular | 95.6 | 95.6 |
| AT5G66140.1 | Thale cress | cytosol | 95.2 | 95.2 |
| KRH69759 | Soybean | endoplasmic reticulum, nucleus | 90.8 | 91.16 |
| Solyc01g111450.2.1 | Tomato | plastid | 90.8 | 91.16 |
| PGSC0003DMT400015849 | Potato | cytosol | 90.8 | 91.16 |
| KRH08047 | Soybean | cytosol, endoplasmic reticulum, nucleus | 90.4 | 90.76 |
| GSMUA_Achr2P03470_001 | Banana | cytosol | 90.4 | 90.76 |
| GSMUA_Achr11P... | Banana | cytosol | 90.4 | 90.76 |
| VIT_03s0038g02300.t01 | Wine grape | cytosol | 90.0 | 90.36 |
| VIT_04s0023g03690.t01 | Wine grape | cytosol | 90.0 | 90.36 |
| Os09t0538200-01 | Rice | cytosol, plastid | 88.8 | 89.16 |
| TraesCS7A01G272000.1 | Wheat | cytosol | 88.8 | 89.16 |
| TraesCS7B01G170000.1 | Wheat | cytosol, golgi, plastid, unclear | 88.8 | 89.16 |
| TraesCS7D01G272300.1 | Wheat | cytosol | 88.8 | 89.16 |
| EER97100 | Sorghum | cytosol | 88.8 | 89.16 |
| Os08t0548900-01 | Rice | plastid | 88.8 | 89.16 |
| Zm00001d006235_P001 | Maize | cytosol, extracellular | 88.4 | 88.75 |
| Zm00001d022629_P001 | Maize | cytosol | 88.4 | 88.75 |
| Zm00001d053217_P001 | Maize | cytosol, extracellular | 88.4 | 88.75 |
| HORVU5Hr1G083350.1 | Barley | cytosol | 87.6 | 87.95 |
| EES15231 | Sorghum | cytosol | 87.6 | 87.95 |
| TraesCS5A01G329300.1 | Wheat | cytosol | 87.6 | 87.95 |
| TraesCS5B01G329400.1 | Wheat | cytosol | 87.6 | 87.95 |
| HORVU7Hr1G057390.2 | Barley | cytosol, nucleus, plastid | 87.6 | 77.11 |
| AT1G79210.1 | Thale cress | cytosol | 35.6 | 37.87 |
| AT1G16470.2 | Thale cress | cytosol | 35.6 | 37.87 |
| AT1G53850.1 | Thale cress | cytosol | 35.6 | 37.55 |
| AT3G14290.1 | Thale cress | cytosol | 35.2 | 37.13 |
| AT5G35590.1 | Thale cress | cytosol | 36.0 | 36.59 |
| AT2G05840.1 | Thale cress | cytosol | 34.8 | 35.37 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 35.2 | 35.2 |
| AT4G15165.1 | Thale cress | cytosol | 28.0 | 33.65 |
| AT1G47250.1 | Thale cress | cytosol | 35.6 | 32.13 |
| AT5G42790.1 | Thale cress | cytosol | 34.8 | 31.3 |
| AT2G27020.2 | Thale cress | cytoskeleton, cytosol, nucleus | 27.2 | 19.37 |
Protein Annotations
| MapMan:19.2.6.1.1.4 | Gene3D:3.60.20.10 | EntrezGene:824289 | UniProt:A0A178VPE4 | ProteinID:AEE78769.1 | ProteinID:AEE78770.1 |
| EMBL:AF043522 | ArrayExpress:AT3G51260 | EnsemblPlantsGene:AT3G51260 | RefSeq:AT3G51260 | TAIR:AT3G51260 | RefSeq:AT3G51260-TAIR-G |
| EnsemblPlants:AT3G51260.1 | TAIR:AT3G51260.1 | EMBL:AY042820 | EMBL:AY052321 | EMBL:AY061899 | EMBL:AY081448 |
| EMBL:AY087443 | ProteinID:CAB62648.1 | ncoils:Coil | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005819 |
| GO:GO:0005829 | GO:GO:0005839 | GO:GO:0005840 | GO:GO:0005856 | GO:GO:0006508 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009507 | GO:GO:0009524 |
| GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019773 |
| GO:GO:0022626 | GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | RefSeq:NP_001030838.1 | RefSeq:NP_190694.1 |
| InterPro:Ntn_hydrolases_N | ProteinID:OAP06742.1 | UniProt:P30186 | Symbol:PAD1 | PFAM:PF00227 | PFAM:PF10584 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00388 | PFscan:PS51475 | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF106 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b | SMART:SM00948 | SUPFAM:SSF56235 |
| UniParc:UPI0000000B9E | EMBL:X66825 | EMBL:Z17987 | SEG:seg | : | : |
Description
PAD1Proteasome endopeptidase complex [Source:UniProtKB/TrEMBL;Acc:A0A178VPE4]
Coordinates
chr3:+:19030926..19033134
Molecular Weight (calculated)
27338.7 Da
IEP (calculated)
7.500
GRAVY (calculated)
-0.264
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MARYDRAITV FSPDGHLFQV EYALEAVRKG NAAVGVRGTD TVVLAVEKKS TPKLQDSRSA RKIVSLDNHI ALACAGLKAD ARVLINKARI ECQSHRLTLE
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TRIPALYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SAGQETVKLA IRALLEVVES
201: GGKNIEVAVM TREEGVLKQL EEEEIDIIVA EIEAEKAAAE AAKKGPAKET
101: DPVTVEYITR YIAGLQQKYT QSGGVRPFGL STLIVGFDPY TRIPALYQTD PSGTFSAWKA NATGRNSNSI REFLEKNYKE SAGQETVKLA IRALLEVVES
201: GGKNIEVAVM TREEGVLKQL EEEEIDIIVA EIEAEKAAAE AAKKGPAKET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.