Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G05840.1 | Thale cress | cytosol | 91.46 | 91.46 |
| KRH26034 | Soybean | nucleus | 88.62 | 88.62 |
| KRH55422 | Soybean | cytosol, endoplasmic reticulum | 87.8 | 87.8 |
| Solyc12g009140.1.1 | Tomato | extracellular | 86.18 | 86.18 |
| PGSC0003DMT400007520 | Potato | cytosol, extracellular | 86.18 | 86.18 |
| GSMUA_Achr10P... | Banana | cytosol | 86.18 | 86.18 |
| VIT_09s0002g00980.t01 | Wine grape | cytosol | 85.37 | 85.37 |
| GSMUA_Achr6P11610_001 | Banana | cytosol | 85.37 | 85.37 |
| Zm00001d048271_P001 | Maize | cytosol, extracellular | 84.96 | 84.96 |
| Zm00001d027896_P001 | Maize | cytosol, extracellular, mitochondrion | 84.96 | 84.96 |
| EER92751 | Sorghum | cytosol | 84.96 | 84.96 |
| Os03t0180400-01 | Rice | cytosol | 84.55 | 84.55 |
| TraesCS4D01G295500.1 | Wheat | cytosol, golgi, plastid, unclear | 83.33 | 83.33 |
| TraesCS4A01G008300.1 | Wheat | cytosol, golgi, plastid, unclear | 83.33 | 83.33 |
| HORVU4Hr1G076770.2 | Barley | cytosol | 83.74 | 73.05 |
| GSMUA_Achr3P02110_001 | Banana | cytosol | 32.52 | 58.39 |
| KXG36677 | Sorghum | plastid | 60.98 | 54.74 |
| Os07t0614100-01 | Rice | cytosol | 51.22 | 49.8 |
| TraesCS2D01G177600.1 | Wheat | mitochondrion | 54.06 | 49.63 |
| TraesCS2A01G170100.1 | Wheat | mitochondrion | 53.66 | 49.25 |
| TraesCS2B01G196400.1 | Wheat | mitochondrion | 52.85 | 44.67 |
| Zm00001d022131_P001 | Maize | mitochondrion | 52.85 | 40.88 |
| AT3G51260.1 | Thale cress | cytosol | 36.59 | 36.0 |
| AT1G16470.2 | Thale cress | cytosol | 34.15 | 35.74 |
| AT5G66140.1 | Thale cress | cytosol | 36.18 | 35.6 |
| AT1G79210.1 | Thale cress | cytosol | 33.74 | 35.32 |
| AT3G14290.1 | Thale cress | cytosol | 32.11 | 33.33 |
| AT1G53850.1 | Thale cress | cytosol | 31.71 | 32.91 |
| AT3G22110.1 | Thale cress | cytosol, mitochondrion | 32.93 | 32.4 |
| AT4G15165.1 | Thale cress | cytosol | 26.83 | 31.73 |
| AT1G47250.1 | Thale cress | cytosol | 31.71 | 28.16 |
| AT5G42790.1 | Thale cress | cytosol | 30.89 | 27.34 |
| AT2G27020.2 | Thale cress | cytoskeleton, cytosol, nucleus | 28.46 | 19.94 |
Protein Annotations
| MapMan:19.2.6.1.1.1 | Gene3D:3.60.20.10 | EntrezGene:833524 | UniProt:A0A178U8E1 | ProteinID:AED93984.1 | EMBL:AF043518 |
| EMBL:AK228466 | ArrayExpress:AT5G35590 | EnsemblPlantsGene:AT5G35590 | RefSeq:AT5G35590 | TAIR:AT5G35590 | RefSeq:AT5G35590-TAIR-G |
| EnsemblPlants:AT5G35590.1 | TAIR:AT5G35590.1 | EMBL:AY092969 | EMBL:AY114564 | ProteinID:BAB09993.1 | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 |
| GO:GO:0005839 | GO:GO:0006508 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0010043 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0019773 | GO:GO:0051603 | InterPro:IPR023332 | InterPro:IPR029055 | RefSeq:NP_198409.1 | InterPro:Ntn_hydrolases_N |
| UniProt:O81146 | ProteinID:OAO90093.1 | Symbol:PAA1 | PFAM:PF00227 | PFAM:PF10584 | PO:PO:0000005 |
| PO:PO:0000293 | PO:PO:0001170 | PO:PO:0007131 | PO:PO:0009001 | PO:PO:0020030 | ScanProsite:PS00388 |
| PFscan:PS51475 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF11 | InterPro:Proteasome_alpha-type | InterPro:Proteasome_asu_N | InterPro:Proteasome_sua/b |
| InterPro:Proteasome_subunit_alpha6 | SMART:SM00948 | SUPFAM:SSF56235 | MEROPS:T01.971 | UniParc:UPI0000132431 | EMBL:Y13691 |
Description
PAA1Proteasome subunit alpha type-6-A [Source:UniProtKB/Swiss-Prot;Acc:O81146]
Coordinates
chr5:-:13765076..13767888
Molecular Weight (calculated)
27295.5 Da
IEP (calculated)
5.664
GRAVY (calculated)
-0.247
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGSGAGYD RHITIFSPEG RLFQVEYAFK AVKTAGITSI GVRGKDSVCV VTQKKVPDKL LDQSSVTHLF PITKYIGLVA TGITADARSL VQQARNQAAE
101: FRFTYGYEMP VDILAKWIAD KSQVYTQHAY MRPLGVVAMV MGVDEENGPL LYKCDPAGHF YGHKATSAGM KEQEAVNFLE KKMKENPSFT FDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RAENPEFRAL TTEEIEEHLT AISERD
101: FRFTYGYEMP VDILAKWIAD KSQVYTQHAY MRPLGVVAMV MGVDEENGPL LYKCDPAGHF YGHKATSAGM KEQEAVNFLE KKMKENPSFT FDETVQTAIS
201: ALQSVLQEDF KATEIEVGVV RAENPEFRAL TTEEIEEHLT AISERD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.