Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003996_P001 | Maize | nucleus | 89.79 | 89.63 |
| Zm00001d025208_P002 | Maize | nucleus | 92.25 | 89.42 |
| Os04t0382800-00 | Rice | nucleus | 69.37 | 69.0 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 64.44 | 65.71 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 63.91 | 64.13 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 57.04 | 63.65 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 63.38 | 63.6 |
| KXG30263 | Sorghum | mitochondrion | 41.37 | 37.78 |
| Bra001412.1-P | Field mustard | nucleus | 17.08 | 27.95 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 29.93 | 27.55 |
| Bra006620.1-P | Field mustard | nucleus | 21.48 | 27.05 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 30.99 | 26.99 |
| CDX88802 | Canola | nucleus | 22.18 | 26.92 |
| CDX70996 | Canola | nucleus | 22.36 | 26.74 |
| AT3G11590.1 | Thale cress | plastid | 29.23 | 26.69 |
| CDY01038 | Canola | plastid | 28.52 | 26.56 |
| Solyc11g068720.1.1 | Tomato | nucleus | 29.4 | 26.34 |
| Bra034827.1-P | Field mustard | plastid | 28.35 | 26.22 |
| CDY08511 | Canola | plastid | 28.35 | 26.18 |
| PGSC0003DMT400067737 | Potato | nucleus | 26.23 | 26.09 |
| CDX92367 | Canola | mitochondrion, plastid | 21.65 | 25.62 |
| Bra002404.1-P | Field mustard | nucleus | 21.83 | 25.62 |
| PGSC0003DMT400072353 | Potato | plastid | 29.4 | 25.5 |
| CDY67997 | Canola | mitochondrion, plastid | 21.13 | 25.48 |
| VIT_08s0007g02790.t01 | Wine grape | plastid | 29.4 | 25.38 |
| CDY56601 | Canola | cytosol, golgi, plastid | 16.37 | 25.2 |
| CDX73866 | Canola | cytosol | 16.37 | 25.2 |
| KRG96225 | Soybean | nucleus | 29.05 | 25.19 |
| AT5G22310.1 | Thale cress | nucleus | 21.13 | 24.95 |
| KRH67971 | Soybean | plastid | 28.7 | 24.7 |
| Solyc10g083190.1.1 | Tomato | plastid | 28.7 | 24.66 |
| Solyc06g074190.2.1 | Tomato | nucleus | 23.42 | 24.54 |
| PGSC0003DMT400015076 | Potato | nucleus | 23.94 | 23.9 |
| KRH25284 | Soybean | plastid | 27.64 | 23.82 |
| KRH30384 | Soybean | plastid | 26.94 | 23.11 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 21.13 | 20.94 |
| EER97816 | Sorghum | mitochondrion, plastid | 18.66 | 17.82 |
| EES19759 | Sorghum | plastid | 19.89 | 16.92 |
| OQU80028 | Sorghum | plastid | 19.54 | 16.82 |
| EES12886 | Sorghum | plastid | 20.25 | 16.62 |
| EES01592 | Sorghum | plastid | 19.37 | 16.27 |
| KXG29970 | Sorghum | nucleus | 19.19 | 15.57 |
| OQU76466 | Sorghum | nucleus | 18.66 | 14.87 |
Protein Annotations
| EnsemblPlants:EES11990 | EnsemblPlantsGene:SORBI_3006G046600 | EntrezGene:8070932 | ncoils:Coil | PANTHER:PTHR31071 | PANTHER:PTHR31071:SF18 |
| ProteinID:EES11990 | ProteinID:EES11990.1 | ProteinID:KXG26063.1 | ProteinID:OQU81356.1 | RefSeq:XP_002447662.1 | SEG:seg |
| UniParc:UPI0001A871CA | UniProt:C5YEB0 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:32288363..32294195
Molecular Weight (calculated)
63358.2 Da
IEP (calculated)
6.737
GRAVY (calculated)
-0.846
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRWDSEDGG AADEAAAAVA VRLANKIRKR RAVSSSGGSD PAAGRRLRSR RPAVLLPRRR TSAGGDMSES SRSRHCRGGG GNRLADGARP SASARRLVDA
101: FWQDMDSGLL QGDAAARRSL VLWSGASTEV SKRSRSKSKI LEADGKGSRR NGHARWLSAD MMSTGSAMEI GTFSQDDVSR CPDKTVNLQD LQNSLIASKE
201: LVKVLAHIWG PGELNPSSVS LISALRSELD VARSHVRKLI KEQKSDSYEI EGLKKQLTEE MESWKVKQKE KVANALQFIV SELDTEKKSR KRAEKTNKKL
301: SIALANTEAS LQAVTKELDR ERKSKGRVEK ICNELIRGID EDKAEVQALK RETEKAQEEL QKEREMLQLA DEWREQRVQM KLLEARLQFE EKNAAVNQLR
401: DELQAYLDTR KEQEPLNDPM QLSHASENGA PPADVVPDRN GGNCSEDGAS EGSDIHSIEL NVDGINRTYT WSYTPSSKGR QRSASRHESI SDRGMDGVNS
501: WRLEQSFWDM DEELEGDWAE GCSNGMLNLD HDEERYLAIK NLREQMLAGS GFIMSQGRED AEREYCGL
101: FWQDMDSGLL QGDAAARRSL VLWSGASTEV SKRSRSKSKI LEADGKGSRR NGHARWLSAD MMSTGSAMEI GTFSQDDVSR CPDKTVNLQD LQNSLIASKE
201: LVKVLAHIWG PGELNPSSVS LISALRSELD VARSHVRKLI KEQKSDSYEI EGLKKQLTEE MESWKVKQKE KVANALQFIV SELDTEKKSR KRAEKTNKKL
301: SIALANTEAS LQAVTKELDR ERKSKGRVEK ICNELIRGID EDKAEVQALK RETEKAQEEL QKEREMLQLA DEWREQRVQM KLLEARLQFE EKNAAVNQLR
401: DELQAYLDTR KEQEPLNDPM QLSHASENGA PPADVVPDRN GGNCSEDGAS EGSDIHSIEL NVDGINRTYT WSYTPSSKGR QRSASRHESI SDRGMDGVNS
501: WRLEQSFWDM DEELEGDWAE GCSNGMLNLD HDEERYLAIK NLREQMLAGS GFIMSQGRED AEREYCGL
001: MPRQNQSVEN LLLLGKIRKR GCSSPTSSTS SILREGYRFK RAIVVGKRGG STTPVPTWRL MGRSPSPRAS GALHAAASPS SHCGSKTGKV SAPAPVSARK
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
101: LAATLWEMNE MPSPRVVEEA APMIRKSRKE RIAPLPPPRS SVHSGSLPPH LSDPSHSPVS ERMERSGTGS RQRRASSTVQ KLRLGDCNVG ARDPINSGSF
201: MDIETRSRVE TPTGSTVGVK TRLKDCSNAL TTSKELLKII NRMWGQDDRP SSSMSLVSAL HSELERARLQ VNQLIHEHKP ENNDISYLMK RFAEEKAVWK
301: SNEQEVVEAA IESVAGELEV ERKLRRRFES LNKKLGKELA ETKSALMKAV KEIENEKRAR VMVEKVCDEL ARDISEDKAE VEELKRESFK VKEEVEKERE
401: MLQLADALRE ERVQMKLSEA KHQLEEKNAA VDKLRNQLQT YLKAKRCKEK TREPPQTQLH NEEAGDYLNH HISFGSYNIE DGEVENGNEE GSGESDLHSI
501: ELNIDNKSYK WPYGEENRGR KSTPRKSLSL QRSISDCVDW VVQSEKLQKS GDGGLDWGRS IDVEPKGYID ETQAYKPNKA SSKDHHILSG SRLSNFRGGS
601: VSKSRLSDAS KGENQNARKS RW
Arabidopsis Description
At3g11590/F24K9_26 [Source:UniProtKB/TrEMBL;Acc:Q9CAW9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.