Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006620.1-P | Field mustard | nucleus | 75.05 | 80.04 |
| CDX70996 | Canola | nucleus | 77.96 | 78.95 |
| CDX92367 | Canola | mitochondrion, plastid | 78.59 | 78.75 |
| CDX88802 | Canola | nucleus | 75.88 | 77.99 |
| CDY67997 | Canola | mitochondrion, plastid | 75.47 | 77.07 |
| Bra002404.1-P | Field mustard | nucleus | 77.55 | 77.07 |
| VIT_06s0080g00930.t01 | Wine grape | plastid | 39.29 | 28.99 |
| AT3G11590.1 | Thale cress | plastid | 35.76 | 27.65 |
| KRH25284 | Soybean | plastid | 35.97 | 26.25 |
| Solyc11g068720.1.1 | Tomato | nucleus | 33.89 | 25.71 |
| KRH30384 | Soybean | plastid | 35.14 | 25.53 |
| PGSC0003DMT400067737 | Potato | nucleus | 28.69 | 24.17 |
| Os02t0506100-00 | Rice | plastid | 21.62 | 23.85 |
| GSMUA_Achr6P16290_001 | Banana | nucleus | 29.11 | 22.69 |
| Solyc06g074190.2.1 | Tomato | nucleus | 25.36 | 22.51 |
| TraesCS7D01G134000.1 | Wheat | nucleus | 26.82 | 22.28 |
| TraesCS7B01G035800.1 | Wheat | nucleus | 26.61 | 22.15 |
| TraesCS7A01G134600.1 | Wheat | nucleus | 26.61 | 22.11 |
| TraesCS2A01G282200.1 | Wheat | nucleus | 25.78 | 21.91 |
| TraesCS2B01G299400.1 | Wheat | nucleus, plastid | 25.16 | 21.72 |
| PGSC0003DMT400015076 | Potato | nucleus | 25.57 | 21.62 |
| TraesCS2D01G281000.1 | Wheat | nucleus, plastid | 25.36 | 21.55 |
| EES11990 | Sorghum | nucleus | 24.95 | 21.13 |
| Zm00001d003996_P001 | Maize | nucleus | 24.53 | 20.74 |
| Zm00001d025208_P002 | Maize | nucleus | 25.16 | 20.65 |
| HORVU2Hr1G069400.8 | Barley | nucleus | 21.62 | 20.43 |
| Os04t0382800-00 | Rice | nucleus | 24.12 | 20.32 |
| GSMUA_Achr6P08260_001 | Banana | nucleus | 23.7 | 19.9 |
| KXG30263 | Sorghum | mitochondrion | 23.7 | 18.33 |
| Zm00001d000402_P001 | Maize | mitochondrion | 20.79 | 18.25 |
| AT2G46250.1 | Thale cress | nucleus | 17.46 | 17.95 |
| AT1G50660.1 | Thale cress | nucleus | 23.91 | 15.86 |
| AT1G64180.1 | Thale cress | nucleus | 19.13 | 15.51 |
| AT5G41620.1 | Thale cress | nucleus | 19.33 | 14.93 |
| AT3G20350.1 | Thale cress | plastid | 20.17 | 14.41 |
Protein Annotations
| MapMan:35.2 | EntrezGene:832291 | ProteinID:AED93009.1 | ArrayExpress:AT5G22310 | EnsemblPlantsGene:AT5G22310 | RefSeq:AT5G22310 |
| TAIR:AT5G22310 | RefSeq:AT5G22310-TAIR-G | EnsemblPlants:AT5G22310.1 | TAIR:AT5G22310.1 | EMBL:AY056795 | EMBL:AY133525 |
| Unigene:At.26295 | ncoils:Coil | RefSeq:NP_568415.1 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001185 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31071 | PANTHER:PTHR31071:SF16 | UniProt:Q93ZM2 | UniParc:UPI00000A5797 | SEG:seg | : |
Description
AT5g22310/MWD9_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM2]
Coordinates
chr5:-:7383583..7385833
Molecular Weight (calculated)
55017.0 Da
IEP (calculated)
8.265
GRAVY (calculated)
-0.995
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQRKKGCKI RKRGGSSSSS SSLARRNRFK RAIFAGKRAA QDDGGSGTPV KSITAAKTPV LLSFSPENLP IDHHQLQKSC VSARKLAATL WEINDDADPP
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.