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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001412.1-P
Bra001717.1-P
Bra001896.1-P
Bra002404.1-P
Bra002606.1-P
Bra006620.1-P
Bra006738.1-P
Bra011462.1-P
Bra012987.1-P
Bra020343.1-P
Bra022347.1-P
Bra023780.1-P
Bra032645.1-P
Bra033247.1-P
Bra034827.1-P
Bra037568.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G22310.1 Bra032645.1-P AT1G01630.1 21798944
AT5G22310.1 Bra033247.1-P AT1G01630.1 21798944
AT5G22310.1 Bra001412.1-P AT3G11590.1 21798944
AT5G22310.1 Bra034827.1-P AT3G11590.1 21798944
AT5G22310.1 Bra001717.1-P AT3G18710.1 21798944
AT5G22310.1 Bra022347.1-P AT3G18710.1 21798944
AT5G22310.1 Bra037568.1-P AT3G18710.1 21798944
AT5G22310.1 Bra001896.1-P AT3G22960.1 21798944
AT5G22310.1 Bra023780.1-P AT3G22960.1 21798944
AT5G22310.1 Bra011462.1-P AT4G33690.1 21798944
AT5G22310.1 Bra002404.1-P AT5G22310.1 21798944
AT5G22310.1 Bra006620.1-P AT5G22310.1 21798944
AT5G22310.1 Bra002606.1-P AT5G58950.1 21798944
AT5G22310.1 Bra006738.1-P AT5G58950.1 21798944
AT5G22310.1 Bra020343.1-P AT5G58950.1 21798944
AT5G22310.1 Bra012987.1-P AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92367 Canola mitochondrion, plastid 95.25 96.04
Bra006620.1-P Field mustard nucleus 73.55 78.94
AT5G22310.1 Thale cress nucleus 77.07 77.55
VIT_06s0080g00930.t01 Wine grape plastid 37.6 27.91
Bra034827.1-P Field mustard plastid 35.12 27.69
KRH25284 Soybean plastid 34.3 25.19
Solyc11g068720.1.1 Tomato nucleus 32.64 24.92
KRH30384 Soybean plastid 33.68 24.62
Os02t0506100-00 Rice plastid 22.11 24.54
PGSC0003DMT400067737 Potato nucleus 27.89 23.64
Bra001412.1-P Field mustard nucleus 16.74 23.34
TraesCS2A01G282200.1 Wheat nucleus 27.27 23.32
Solyc06g074190.2.1 Tomato nucleus 25.83 23.06
TraesCS2B01G299400.1 Wheat nucleus, plastid 26.45 22.98
TraesCS2D01G281000.1 Wheat nucleus, plastid 26.86 22.97
TraesCS7B01G035800.1 Wheat nucleus 26.65 22.32
GSMUA_Achr6P16290_001 Banana nucleus 28.31 22.2
PGSC0003DMT400015076 Potato nucleus 26.03 22.14
TraesCS7A01G134600.1 Wheat nucleus 26.45 22.11
TraesCS7D01G134000.1 Wheat nucleus 26.45 22.11
EES11990 Sorghum nucleus 25.62 21.83
HORVU2Hr1G069400.8 Barley nucleus 22.93 21.81
Zm00001d003996_P001 Maize nucleus 25.41 21.62
Os04t0382800-00 Rice nucleus 25.21 21.37
Zm00001d025208_P002 Maize nucleus 25.0 20.65
KXG30263 Sorghum mitochondrion 24.79 19.29
GSMUA_Achr6P08260_001 Banana nucleus 22.52 19.02
Zm00001d000402_P001 Maize mitochondrion 20.87 18.43
Bra004552.1-P Field mustard nucleus 14.46 16.99
Bra018866.1-P Field mustard nucleus 22.73 16.34
Bra027683.1-P Field mustard nucleus 19.21 16.15
Bra025484.1-P Field mustard nucleus 19.01 15.46
Bra035788.1-P Field mustard mitochondrion 20.04 15.23
Protein Annotations
EnsemblPlants:Bra002404.1EnsemblPlants:Bra002404.1-PEnsemblPlantsGene:Bra002404ncoils:CoilPANTHER:PTHR31071PANTHER:PTHR31071:SF16
SEG:segUniParc:UPI000254467FUniProt:M4CDX3MapMan:35.2::
Description
AT5G22310 (E=1e-147) | unknown protein
Coordinates
chrA10:+:9813691..9815324
Molecular Weight (calculated)
55806.9 Da
IEP (calculated)
7.666
GRAVY (calculated)
-1.046
Length
484 amino acids
Sequence
(BLAST)
001: MDRKRGCKIR KRGCSSSSSS SLARRNRFKR AIFAGKRASL EDGGGSGTPV KSISAAKTPV LLPFSPENPP LGQSQKRCVS ARKLAATLWE ISDGNTEPHV
101: SNEDCLRNKK PPRNRRKTST EIPFPDFPLK SSHPVSHERI LLRDDTVRRR SKIPQKLQVV EYKTIGTNSV TTRFKNINEG LTTSKELVKV LKKIGHLGDD
201: HKTASNRLIS ALVYELDRAR SSLKHLMSEF NAEEAEKRRL VEKLQEEAVS ERKLRLRTEK MNMRLGRELE EAKETERKMK EEMEREKRAK DVLEEVCDEL
301: ARGIGDDKKE MEKEREMMHI ADVLREERVQ MKLTEARHEF EEKHAAVERL KKELRRVVEG EEEEKGSSGI RRVLEMIDGS DDDEEEEEEE EEESDLKSIE
401: LNMESGSKWG YVESRRDGRR ESRFVGPSED DDDHVEKRSV IVDNGERDES LKTLREYIVS NARFIGSSSS EQWNHRHLPN VEFV
Best Arabidopsis Sequence Match ( AT5G22310.1 )
(BLAST)
001: MEQRKKGCKI RKRGGSSSSS SSLARRNRFK RAIFAGKRAA QDDGGSGTPV KSITAAKTPV LLSFSPENLP IDHHQLQKSC VSARKLAATL WEINDDADPP
101: VNSDKDCLRS KKPSRYRAKK STEFSSIDFP PRSSDPISRL SSERIDLCDD MIRRRSTNPQ KLNPIEYKII GANSVKTRFK NVSDGLTTSK ELVKVLKRIG
201: ELGDDHKTAS NRLISALLCE LDRARSSLKH LMSELDEEEE EKRRLIESLQ EEAMVERKLR RRTEKMNRRL GRELTEAKET ERKMKEEMKR EKRAKDVLEE
301: VCDELTKGIG DDKKEMEKER EMMHIADVLR EERVQMKLTE AKFEFEDKYA AVERLKKELR RVLDGEEGKG SSEIRRILEV IDGSGSDDDE ESDLKSIELN
401: MESGSKWGYV DSLKDRRRFD GSGGDDDDDD PVEKRSVIVE NGERDESLKT LRDYIVSNVR CIGPSSSEQW NHRNLPSSEF V
Arabidopsis Description
AT5g22310/MWD9_9 [Source:UniProtKB/TrEMBL;Acc:Q93ZM2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.